RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
SCMH1-217ENST00000498793 NOL7Q9UMY1 257 aaKnown RBP12.97□□□□□ -0.33
SCMH1-217ENST00000498793 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
SCMH1-217ENST00000498793 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
SCMH1-217ENST00000498793 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.97□□□□□ -0.33
SCMH1-217ENST00000498793 A0A0C4DFX4 3053 aa12.97□□□□□ -0.33
SCMH1-217ENST00000498793 TCF20Q9UGU0 1960 aaKnown RBP12.97□□□□□ -0.33
SCMH1-217ENST00000498793 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.33
SCMH1-217ENST00000498793 MAGEB2O15479 319 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
SCMH1-217ENST00000498793 MAFO75444 373 aaPredicted RBP12.96□□□□□ -0.33
SCMH1-217ENST00000498793 RPS6KA5O75582 802 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 CSPG5O95196 566 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 AMHP03971 560 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 FOSL2P15408 326 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.33
SCMH1-217ENST00000498793 MAEAQ7L5Y9 396 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 KCNK18Q7Z418 384 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 RHPN2Q8IUC4 686 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 C4orf19Q8IY42 314 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 PHOSPHO2Q8TCD6 241 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 LRRC15Q8TF66 581 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 NLRP7Q8WX94 980 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 SCLT1Q96NL6 688 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 MMTAG2Q9BU76 263 aaKnown RBP12.96□□□□□ -0.33
SCMH1-217ENST00000498793 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
SCMH1-217ENST00000498793 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 MINDY3Q9H8M7 445 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.33
SCMH1-217ENST00000498793 VCANP13611 3396 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 SYT1P21579 422 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 TRAPPC10P48553 1259 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 RARRES1P49788 294 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 CRYBB1P53674 252 aaPredicted RBP12.95□□□□□ -0.34
SCMH1-217ENST00000498793 POLGP54098 1239 aaPredicted RBP12.95□□□□□ -0.34
SCMH1-217ENST00000498793 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
SCMH1-217ENST00000498793 PKP1Q13835 747 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 DSC3Q14574 896 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 LONRF3Q496Y0 759 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 PPM1EQ8WY54 764 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 PLIN2Q99541 437 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 ADAM2Q99965 735 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 RC3H2Q9HBD1 1191 aaKnown RBP12.95□□□□□ -0.34
SCMH1-217ENST00000498793 RNF19AQ9NV58 838 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
SCMH1-217ENST00000498793 LINC00271P0C7V0 271 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 FGFR1P11362 822 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 DARSP14868 501 aaKnown RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 ATP2C1P98194 919 aaPredicted RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 CCDC85BQ15834 202 aaPredicted RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 NME8Q8N427 588 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 APBB2Q92870 758 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 RAD9AQ99638 391 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
SCMH1-217ENST00000498793 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 STXBP5LQ9Y2K9 1186 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 KIF3AQ9Y496 699 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 XIRP2A4UGR9 3374 aa12.94□□□□□ -0.34
SCMH1-217ENST00000498793 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 MEIS3P2A8K0S8 358 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 LPXNO60711 386 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 LYPLA2O95372 231 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 IGFBP4P22692 258 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 CEBPZQ03701 1054 aaKnown RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 GRB10Q13322 594 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 CAPSQ13938 189 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 FAM102BQ5T8I3 360 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 FOXD4L3Q6VB84 417 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 CRIPAKQ8N1N5 446 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 SNX29Q8TEQ0 813 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 SNX21Q969T3 373 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 POLR3FQ9H1D9 316 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 IFT122Q9HBG6 1241 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 COL4A3BPQ9Y5P4 624 aa12.93□□□□□ -0.34
SCMH1-217ENST00000498793 MRPL42Q9Y6G3 142 aaKnown RBP12.93□□□□□ -0.34
SCMH1-217ENST00000498793 ADGRA3Q8IWK6 1321 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 C9IYK1 514 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 E9PMD0 336 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 EFCAB14O75071 495 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 EDN1P05305 212 aa12.92□□□□□ -0.34
SCMH1-217ENST00000498793 ATF7P17544 494 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms