RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TRIM50Q86XT4 487 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 C2CD5Q86YS7 1000 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NEK9Q8TD19 979 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ELAC2Q9BQ52 826 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 LLPHQ9BRT6 129 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ARHGEF38Q9NXL2 777 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NOVA2Q9UNW9 492 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NFS1Q9Y697 457 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ADAMTS7Q9UKP4 1686 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 USP17L3A6NCW0 530 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 USP17L4A6NCW7 530 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 LSM1O15116 133 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 PLCG2P16885 1265 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 IFFO1Q0D2I5 559 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 MRPL58Q14197 206 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZRSR2Q15696 482 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 SLC10A5Q5PT55 438 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 USP17L1Q7RTZ2 530 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 JAMLQ86YT9 394 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 LRRC34Q8IZ02 419 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 FLAD1Q8NFF5 587 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 XPO6Q96QU8 1125 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 UIMC1Q96RL1 719 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 TMBIM4Q9HC24 238 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 CABP5Q9NP86 173 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 SERTAD1Q9UHV2 236 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 PACSIN2Q9UNF0 486 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 TAF1P21675 1872 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 RFX7Q2KHR2 1363 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 A0A087X0B3 334 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM170AA1A519 330 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 SLURP2P0DP57 97 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 PYGMP11217 842 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 CMA1P23946 247 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ECHS1P30084 290 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NLRP5P59047 1200 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 MAGOHP61326 146 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF844Q08AG5 666 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 VAC14Q08AM6 782 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 IKQ13123 557 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 NR5A1Q13285 461 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 EAPPQ56P03 285 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 DPY19L2Q6NUT2 758 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZCCHC8Q6NZY4 707 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 CPLX4Q7Z7G2 160 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 PPFIBP1Q86W92 1011 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 SLF2Q8IX21 1173 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 DIS3L2Q8IYB7 885 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 MAGOHBQ96A72 148 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM136AQ96C01 138 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 FGD4Q96M96 766 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 ECT2Q9H8V3 914 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 LY9Q9HBG7 655 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 DCP1AQ9NPI6 582 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 TAB2Q9NYJ8 693 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 HDAC9Q9UKV0 1011 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 HPS5Q9UPZ3 1129 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 SPO11Q9Y5K1 396 aa6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 EPN1Q9Y6I3 576 aaPredicted RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.26□□□□□ -1.41
SOX2-OT-218ENST00000498731 TTC26A0AVF1 554 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM196BA6NMK8 535 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 LIN7AO14910 233 aaPredicted RBP6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 TACC1O75410 805 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 MOCS3O95396 460 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 PLEKHA8P1O95397 391 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZCCHC18P0CG32 403 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 XBP1P17861 261 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 ATP2B4P23634 1241 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 KRT9P35527 623 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 PCK1P35558 622 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 SESN3P58005 492 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 CNPY1Q3B7I2 92 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 DALRD3Q5D0E6 543 aaKnown RBP6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 ANO1Q5XXA6 986 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 OLFML2BQ68BL8 750 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 SEPT14Q6ZU15 432 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 FANCBQ8NB91 859 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 IGDCC4Q8TDY8 1250 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 NRG4Q8WWG1 115 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 ABTB1Q969K4 478 aaPredicted RBP6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 MKL1Q969V6 931 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 OPTNQ96CV9 577 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 TMEM237Q96Q45 408 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 NUP88Q99567 741 aaPredicted RBP6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 TAF1DQ9H5J8 278 aaPredicted RBP6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 AGPAT5Q9NUQ2 364 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 POLLQ9UGP5 575 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF180Q9UJW8 692 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 EFR3BQ9Y2G0 817 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 TACC3Q9Y6A5 838 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 NUP98P52948 1817 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 H0YIN7 160 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 OR6B1O95007 311 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 COL6A2P12110 1019 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 SCG2P13521 617 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 DPEP1P16444 411 aa6.25□□□□□ -1.41
SOX2-OT-218ENST00000498731 TM4SF1P30408 202 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms