RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 NLRP11P59045 1033 aaKnown RBP10.38□□□□□ -0.75
CCDC171-209ENST00000498725 FAM189BP81408 668 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ZNF484Q5JVG2 852 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 CLLU1OSQ5K130 101 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ATAT1Q5SQI0 421 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ECHDC2Q86YB7 292 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 MB21D2Q8IYB1 491 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ZDHHC14Q8IZN3 488 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 SIX5Q8N196 739 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 VPS52Q8N1B4 723 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 SLC39A11Q8N1S5 342 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 RIN2Q8WYP3 895 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-209ENST00000498725 SCLT1Q96NL6 688 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 HINFPQ9BQA5 517 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ELAC1Q9H777 363 aaKnown RBP10.38□□□□□ -0.75
CCDC171-209ENST00000498725 R4GN57 208 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 COL1A2P08123 1366 aa10.38□□□□□ -0.75
CCDC171-209ENST00000498725 ZBTB42B2RXF5 422 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 HOXA2O43364 376 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ZC3H11AO75152 810 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC171-209ENST00000498725 GPR32O75388 356 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ATG7O95352 703 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 C22orf31O95567 290 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 EOMESO95936 686 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 SSBP05455 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC171-209ENST00000498725 CFHP08603 1231 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 MYBP10242 640 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 NPR3P17342 541 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 AOC1P19801 751 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ATP4AP20648 1035 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ALDH7A1P49419 539 aaKnown RBP10.37□□□□□ -0.75
CCDC171-209ENST00000498725 GNAQP50148 359 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 NAPAP54920 295 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 BMS1Q14692 1282 aaKnown RBP10.37□□□□□ -0.75
CCDC171-209ENST00000498725 KIAA1841Q6NSI8 718 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ABHD15Q6UXT9 468 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 CABP7Q86V35 215 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 CCDC105Q8IYK2 499 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 LRRC71Q8N4P6 559 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ACSF2Q96CM8 615 aaPredicted RBP10.37□□□□□ -0.75
CCDC171-209ENST00000498725 RMDN1Q96DB5 314 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 TMEM169Q96HH4 297 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 MAP3K14Q99558 947 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 LRRC2Q9BYS8 371 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 ANO3Q9BYT9 981 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 GBP3Q9H0R5 595 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 CYP26B1Q9NR63 512 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 CACNA1HO95180 2353 aa10.37□□□□□ -0.75
CCDC171-209ENST00000498725 PTPRZ1P23471 2315 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-209ENST00000498725 NARSO43776 548 aaKnown RBP10.36□□□□□ -0.75
CCDC171-209ENST00000498725 CSDE1O75534 798 aaKnown RBP10.36□□□□□ -0.75
CCDC171-209ENST00000498725 SMARCA1P28370 1054 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 SLC26A2P50443 739 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 TDGQ13569 410 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-209ENST00000498725 CEP55Q53EZ4 464 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 SPECC1Q5M775 1068 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 WWC2Q6AWC2 1192 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 EFCAB12Q6NXP0 572 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 MIS18BP1Q6P0N0 1132 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 DGLUCYQ7Z3D6 616 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 TMEM173Q86WV6 379 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-209ENST00000498725 PLA2G4DQ86XP0 818 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 LPPQ93052 612 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 DZANK1Q9NVP4 752 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 CA14Q9ULX7 337 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 INPP5FQ9Y2H2 1132 aa10.36□□□□□ -0.75
CCDC171-209ENST00000498725 DCHS1Q96JQ0 3298 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 FAM186AA6NE01 2351 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 IGKV6D-21A0A0A0MT36 114 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 LMNAP02545 664 aaKnown RBP10.35□□□□□ -0.75
CCDC171-209ENST00000498725 GSPT1P15170 499 aaKnown RBP10.35□□□□□ -0.75
CCDC171-209ENST00000498725 ADCY7P51828 1080 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 CCDC149Q6ZUS6 474 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 MICU3Q86XE3 530 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 RSAD2Q8WXG1 361 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 MAP7D2Q96T17 732 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 RTP3Q9BQQ7 232 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 ZBP1Q9H171 429 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 KCNK12Q9HB15 430 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 SAMM50Q9Y512 469 aa10.35□□□□□ -0.75
CCDC171-209ENST00000498725 RBM8AQ9Y5S9 174 aaKnown RBP10.35□□□□□ -0.75
CCDC171-209ENST00000498725 MEIS1O00470 390 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-209ENST00000498725 KRT37O76014 449 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 CALM1P0DP23 149 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 CALM2P0DP24 149 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 CALM3P0DP25 149 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 CHMLP26374 656 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 KLRC2P26717 231 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 GBP2P32456 591 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-209ENST00000498725 RNASELQ05823 741 aaKnown RBP10.34□□□□□ -0.75
CCDC171-209ENST00000498725 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 JAKMIP3Q5VZ66 844 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 TYW1BQ6NUM6 668 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms