RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 COL4A2P08572 1712 aa6.21□□□□□ -1.42
FXN-205ENST00000498653 ATRQ13535 2644 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 ANHXE9PGG2 379 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 F6X3S4 739 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 KPNA6O60684 536 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 IFIT1P09914 478 aaKnown RBP6.2□□□□□ -1.42
FXN-205ENST00000498653 ADSSP30520 456 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 HOXC13P31276 330 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 IL12RB1P42701 662 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 GPC5P78333 572 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 LETM2Q2VYF4 491 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 RSPO2Q6UXX9 243 aaPredicted RBP6.2□□□□□ -1.42
FXN-205ENST00000498653 CEP68Q76N32 757 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 PIP4P1Q86T03 277 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 LONP2Q86WA8 852 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 MAPKAPK5Q8IW41 473 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 ANKRD35Q8N283 1001 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 PANK1Q8TE04 598 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 LINC01599Q8WXQ3 324 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 APBB2Q92870 758 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 NXPE3Q969Y0 559 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 WBP1Q96G27 269 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 VTA1Q9NP79 307 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 TMEM9BQ9NQ34 198 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 ENTPD7Q9NQZ7 604 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 TNNQ9UQP3 1299 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 SALL3Q9BXA9 1300 aa6.2□□□□□ -1.42
FXN-205ENST00000498653 NIPBLQ6KC79 2804 aaeCLIP6.2□□□□□ -1.426e-7■■■□□ 15
FXN-205ENST00000498653 BLACEA4D250 179 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ASB14A6NK59 587 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 K7ESF4 209 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 C2CD2LO14523 706 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ALDH1L1O75891 902 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 RLBP1P12271 317 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 EPCAMP16422 314 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 THPOP40225 353 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 GATMP50440 423 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 CCR3P51677 355 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 PDE4BQ07343 736 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 CYP4F3Q08477 520 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ZNF423Q2M1K9 1284 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 TAF1BQ53T94 588 aaPredicted RBP6.19□□□□□ -1.42
FXN-205ENST00000498653 C20orf194Q5TEA3 1177 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 GPR155Q7Z3F1 870 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 KRT25Q7Z3Z0 450 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 KBTBD6Q86V97 674 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 TMC8Q8IU68 726 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 TICAM1Q8IUC6 712 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ITPRIPQ8IWB1 547 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 TMEM57Q8N5G2 664 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ST13P5Q8NFI4 369 aaPredicted RBP6.19□□□□□ -1.42
FXN-205ENST00000498653 LINS1Q8NG48 757 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 EPS8L1Q8TE68 723 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 MORC4Q8TE76 937 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ARID3AQ99856 593 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ARHGAP9Q9BRR9 750 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 WDR11Q9BZH6 1224 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 SRCIN1Q9C0H9 1055 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 CHMP4BQ9H444 224 aaKnown RBP6.19□□□□□ -1.42
FXN-205ENST00000498653 TMEM260Q9NX78 707 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 ABCF2Q9UG63 623 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 SAP30BPQ9UHR5 308 aaKnown RBP6.19□□□□□ -1.42
FXN-205ENST00000498653 DENND2AQ9ULE3 1009 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 LZTS1Q9Y250 596 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 NUMBLQ9Y6R0 609 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 FN1P02751 2386 aaKnown RBP6.19□□□□□ -1.42
FXN-205ENST00000498653 F5P12259 2224 aa6.19□□□□□ -1.42
FXN-205ENST00000498653 MED13LQ71F56 2210 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 RBM47A0AV96 593 aaKnown RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 C2orf71A6NGG8 1288 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 ATP2A1O14983 1001 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 MYF5P13349 255 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 VARSP26640 1264 aaKnown RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 GBP2P32456 591 aaPredicted RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 SHMT1P34896 483 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 ZNF76P36508 570 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 ABL2P42684 1182 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 PHKA1P46020 1223 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 SH3BP2P78314 561 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 IRX6P78412 446 aaPredicted RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 PPP2R5DQ14738 602 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 MVPQ14764 893 aaKnown RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 CERKLQ49MI3 558 aaPredicted RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 SLC44A4Q53GD3 710 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 BEND3Q5T5X7 828 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 SERINC5Q86VE9 423 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 SIAH1Q8IUQ4 282 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 EHBP1Q8NDI1 1231 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 TGFBRAP1Q8WUH2 860 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 ADAMTS14Q8WXS8 1223 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 COPS5Q92905 334 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 NSUN4Q96CB9 384 aaKnown RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 RPP25Q9BUL9 199 aaKnown RBP6.18□□□□□ -1.42
FXN-205ENST00000498653 SLC32A1Q9H598 525 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 VCPKMTQ9H867 229 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 GDPD2Q9HCC8 539 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 DDX19BQ9UMR2 479 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms