RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 TCP11Q8WWU5 503 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 TMEM143Q96AN5 459 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 GAS2L1Q99501 681 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-213ENST00000498495 MTRQ99707 1265 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-213ENST00000498495 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-213ENST00000498495 TMX1Q9H3N1 280 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 PRDM12Q9H4Q4 367 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
HSPG2-213ENST00000498495 BMP2KQ9NSY1 1161 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-213ENST00000498495 A0A087WZ62 844 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 ASAP2O43150 1006 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 GAS2O43903 313 aaKnown RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 DGAT1O75907 488 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 STAG3L1P0CL83 205 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 FOSL2P15408 326 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 MUTP22033 750 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 CCT6AP40227 531 aaKnown RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 RARRES1P49788 294 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 EMC2Q15006 297 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 FERMT3Q86UX7 667 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 ZNF410Q86VK4 478 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 KSR1Q8IVT5 923 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 PRPF31Q8WWY3 499 aaKnown RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 PSPC1Q8WXF1 523 aaKnown RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 LINC01599Q8WXQ3 324 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 ARNTL2Q8WYA1 636 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 NLRP4Q96MN2 994 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 ADAM2Q99965 735 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 FDXACB1Q9BRP7 624 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 RGS18Q9NS28 235 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 C1orf112Q9NSG2 853 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-213ENST00000498495 LRFN2Q9ULH4 789 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 COL4A3BPQ9Y5P4 624 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 GBF1Q92538 1859 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 SIP14410 1827 aa14.27□□□□□ -0.13
HSPG2-213ENST00000498495 MICAL3Q7RTP6 2002 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 CSDE1O75534 798 aaKnown RBP14.26□□□□□ -0.13
HSPG2-213ENST00000498495 SRGAP2CP0DJJ0 459 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 IBSPP21815 317 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-213ENST00000498495 ATP2C1P98194 919 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-213ENST00000498495 IL17AQ16552 155 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 KRT79Q5XKE5 535 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 SLC24A5Q71RS6 500 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 IGSF22Q8N9C0 903 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 ATP6V0A4Q9HBG4 840 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 DBR1Q9UK59 544 aaKnown RBP14.26□□□□□ -0.13
HSPG2-213ENST00000498495 PCDHB7Q9Y5E2 793 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 SZT2Q5T011 3432 aa14.26□□□□□ -0.13
HSPG2-213ENST00000498495 LOXHD1Q8IVV2 1947 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 LINC01553A4QN01 128 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 MGEA5O60502 916 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 ARHGEF15O94989 841 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 FGFR4P22455 802 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 IGFBP4P22692 258 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
HSPG2-213ENST00000498495 LAMTOR4Q0VGL1 99 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 MXD4Q14582 209 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-213ENST00000498495 ARL6IP4Q66PJ3 421 aaKnown RBP14.25□□□□□ -0.13
HSPG2-213ENST00000498495 POTEGQ6S5H5 508 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 NPAS4Q8IUM7 802 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 SNX29Q8TEQ0 813 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 TGS1Q96RS0 853 aaKnown RBP14.25□□□□□ -0.13
HSPG2-213ENST00000498495 KIAA1024Q9UPX6 916 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 PTPRSQ13332 1948 aa14.25□□□□□ -0.13
HSPG2-213ENST00000498495 VWA3AA6NCI4 1184 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 RFXAPO00287 272 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 STX6O43752 255 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 DGKIO75912 1065 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 BMP15O95972 392 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
HSPG2-213ENST00000498495 CDC25AP30304 524 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 ERVK-21P61565 698 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 BTG3Q14201 252 aaPredicted RBP14.24□□□□□ -0.13
HSPG2-213ENST00000498495 DSC3Q14574 896 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 SF3A1Q15459 793 aaKnown RBP14.24□□□□□ -0.13
HSPG2-213ENST00000498495 MAEAQ7L5Y9 396 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 SRGAP1Q7Z6B7 1085 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 RNF149Q8NC42 400 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
HSPG2-213ENST00000498495 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 XPNPEP1Q9NQW7 623 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 CHST12Q9NRB3 414 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
HSPG2-213ENST00000498495 MTUS1Q9ULD2 1270 aa14.24□□□□□ -0.13
HSPG2-213ENST00000498495 ARHGEF35A5YM69 484 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 PP2D1A8MPX8 630 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 C9IYK1 514 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 USO1O60763 962 aaKnown RBP14.23□□□□□ -0.13
HSPG2-213ENST00000498495 ARL2P36404 184 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 FAM189BP81408 668 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 TFDP1Q14186 410 aa14.23□□□□□ -0.13
HSPG2-213ENST00000498495 ZRSR1Q15695 479 aaKnown RBP14.23□□□□□ -0.13
HSPG2-213ENST00000498495 ECM1Q16610 540 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms