RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 HOOK1Q9UJC3 728 aaKnown RBP12.7□□□□□ -0.38
CTTN-208ENST00000498223 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 ACTN4O43707 911 aaKnown RBP12.69□□□□□ -0.38
CTTN-208ENST00000498223 HIP1RO75146 1068 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 TBCAO75347 108 aaKnown RBP12.69□□□□□ -0.38
CTTN-208ENST00000498223 NR1I2O75469 434 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 FAM13AO94988 1023 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 VTNP04004 478 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 CLTBP09497 229 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 IDEP14735 1019 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 PTMSP20962 102 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 HOXC8P31273 242 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 MAGEA10P43363 369 aaPredicted RBP12.69□□□□□ -0.38
CTTN-208ENST00000498223 ADAM17P78536 824 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
CTTN-208ENST00000498223 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 IER5Q5VY09 327 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 KANK3Q6NY19 840 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 C1orf186Q6ZWK4 172 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 ANKRD33Q7Z3H0 272 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 SERINC5Q86VE9 423 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 RHPN2Q8IUC4 686 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 PSPC1Q8WXF1 523 aaKnown RBP12.69□□□□□ -0.38
CTTN-208ENST00000498223 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 TOX2Q96NM4 488 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 CEP89Q96ST8 783 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 POLR3FQ9H1D9 316 aaPredicted RBP12.69□□□□□ -0.38
CTTN-208ENST00000498223 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 DACT1Q9NYF0 836 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 GINS2Q9Y248 185 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 TANC1Q9C0D5 1861 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 SIP14410 1827 aa12.69□□□□□ -0.38
CTTN-208ENST00000498223 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 MYMKA6NI61 221 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 CD4P01730 458 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 RPLP2P05387 115 aaKnown RBP12.68□□□□□ -0.38
CTTN-208ENST00000498223 CTSHP09668 335 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 ASIC1P78348 528 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 TFDP1Q14186 410 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 GRAMD1CQ8IYS0 662 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 NME8Q8N427 588 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 ZNF668Q96K58 619 aaPredicted RBP12.68□□□□□ -0.38
CTTN-208ENST00000498223 NLRP4Q96MN2 994 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 TIPINQ9BVW5 301 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 BLZF1Q9H2G9 400 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 XPNPEP1Q9NQW7 623 aa12.68□□□□□ -0.38
CTTN-208ENST00000498223 LRRIQ4A6NIV6 560 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 SFI1A8K8P3 1242 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 SOX1O00570 391 aaPredicted RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 ASAP2O43150 1006 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 MBD3O95983 291 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 RAG1P15918 1043 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 GUCY2CP25092 1073 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 CASP1P29466 404 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 NLRP11P59045 1033 aaKnown RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 MRPS6P82932 125 aaKnown RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 DRP2Q13474 957 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 GIT2Q14161 759 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 MXD4Q14582 209 aaPredicted RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 ARSHQ5FYA8 562 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 CCDC65Q8IXS2 484 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 MYCT1Q8N699 235 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 ENGASEQ8NFI3 743 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 PRPF31Q8WWY3 499 aaKnown RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 NLRP7Q8WX94 980 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 CCDC47Q96A33 483 aaKnown RBP12.67□□□□□ -0.38
CTTN-208ENST00000498223 TIGD1Q96MW7 591 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 ODF2LQ9ULJ1 636 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 COL4A3BPQ9Y5P4 624 aa12.67□□□□□ -0.38
CTTN-208ENST00000498223 RSPH10B2B2RC85 870 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
CTTN-208ENST00000498223 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 RSPH10BP0C881 870 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 CKBP12277 381 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 PEX3P56589 373 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 CDC42EP1Q00587 391 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 LAMTOR4Q0VGL1 99 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
CTTN-208ENST00000498223 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
CTTN-208ENST00000498223 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 CAMK4Q16566 473 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 KIZQ2M2Z5 673 aa12.66□□□□□ -0.38
CTTN-208ENST00000498223 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms