RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TRERF1Q96PN7 1200 aa8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 POLR3CQ9BUI4 534 aaPredicted RBP8.7□□□□□ -1.02
HLA-DMB-262ENST00000498020 BAZ2AQ9UIF9 1905 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 ARAP2Q8WZ64 1704 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 SSU72P8A0A1W2PR75 194 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 LRRIQ4A6NIV6 560 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 FERP16591 822 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 TNFAIP3P21580 790 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 STRN3Q13033 797 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 FRMD5Q7Z6J6 570 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 DYDC2Q96IM9 177 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 K7ENM7 598 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 ATP2A1O14983 1001 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 CLIC2O15247 247 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 N4BP1O75113 896 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 TXNP10599 105 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 BCRP11274 1271 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 ACTN1P12814 892 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 NOVP48745 357 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 XKR9Q5GH70 373 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 APTXQ7Z2E3 356 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 SREK1Q8WXA9 508 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 HAS1Q92839 578 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 NRBP2Q9NSY0 501 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 CYP3A7-CYP3A51PA0A087WV96 503 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 CA12O43570 354 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 MED24O75448 989 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 SEC31AO94979 1220 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 NR3C1P04150 777 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 H2AFZP0C0S5 128 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 CYP3A7P24462 503 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 ALCAMQ13740 583 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 TTLL4Q14679 1199 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 RPS6KA1Q15418 735 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 C8orf74Q6P047 294 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 ELMSAN1Q6PJG2 1045 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 FOXR2Q6PJQ5 311 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 H2AFVQ71UI9 128 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 OTUD6AQ7L8S5 288 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 IRF2BP1Q8IU81 584 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 IQCGQ9H095 443 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 RGL1Q9NZL6 768 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 RNF14Q9UBS8 474 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 KCNG1Q9UIX4 513 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 C4AP0C0L4 1744 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 C4BP0C0L5 1744 aa8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 DDX60Q8IY21 1712 aaKnown RBP8.69□□□□□ -1.02
HLA-DMB-262ENST00000498020 GON4LQ3T8J9 2241 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 C19orf81C9J6K1 198 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 MSH4O15457 936 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 BUB1O43683 1085 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 FDX1P10109 184 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 FKBP1CQ5VVH2 108 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 CC2D1AQ6P1N0 951 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 PLEKHH3Q7Z736 793 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 RNF10Q8N5U6 811 aaKnown RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 MSANTD4Q8NCY6 345 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 DEPTORQ8TB45 409 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 ACER1Q8TDN7 264 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 LPAR1Q92633 364 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 REEP2Q9BRK0 252 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 TMEM206Q9H813 350 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 RASAL2Q9UJF2 1139 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 ZNF541Q9H0D2 1346 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 CACNA1SQ13698 1873 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 NPHP3-ACAD11A0A0J9YXS1 232 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 IPO5O00410 1097 aaKnown RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 GNAT1P11488 350 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 H2AFXP16104 143 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 SYCE1Q8N0S2 351 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM133AQ8N9E0 248 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 CLMNQ96JQ2 1002 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 PSMB7Q99436 277 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 HSF2BPO75031 334 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 OAS2P29728 719 aaKnown RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 POLGP54098 1239 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 STXBP2Q15833 593 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 C6orf163Q5TEZ5 329 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 KCNK18Q7Z418 384 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM83AQ86UY5 434 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 OR6J1Q8NGC5 347 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 MTMR8Q96EF0 704 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 TEX13BQ9BXU2 312 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 VPS33BQ9H267 617 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 MYPNQ86TC9 1320 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 WDR46O15213 610 aaKnown RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 PPP1R11O60927 126 aaPredicted RBP8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 MOCS3O95396 460 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 ELNP15502 786 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 CAP2P40123 477 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 KLK7P49862 253 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 HYIQ5T013 277 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 FAM160B1Q5W0V3 765 aa8.68□□□□□ -1.02
HLA-DMB-262ENST00000498020 BTNL9Q6UXG8 535 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms