RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 FAM43BQ6ZT52 329 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 TMCO2Q7Z6W1 182 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 TMEM40Q8WWA1 233 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 TMEM143Q96AN5 459 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 NLRP4Q96MN2 994 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 GCOM2Q9BZD3 368 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 NKX2-4Q9H2Z4 354 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 ST3GAL5Q9UNP4 418 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 A0A087WWV3 80 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 PP2D1A8MPX8 630 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
MRPL55-234ENST00000497758 UPP2O95045 317 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 GJB5O95377 273 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 DARSP14868 501 aaKnown RBP13.07□□□□□ -0.32
MRPL55-234ENST00000497758 MYOGP15173 224 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 IL17AQ16552 155 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 ZNF410Q86VK4 478 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 PRPF31Q8WWY3 499 aaKnown RBP13.07□□□□□ -0.32
MRPL55-234ENST00000497758 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 RAD9AQ99638 391 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 INO80BQ9C086 356 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-234ENST00000497758 ZNF576Q9H609 170 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 ERVK-5Q9HDB9 667 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 DDX19AQ9NUU7 478 aaKnown RBP13.07□□□□□ -0.32
MRPL55-234ENST00000497758 KIAA1024Q9UPX6 916 aa13.07□□□□□ -0.32
MRPL55-234ENST00000497758 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 A0A087WZ62 844 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 ENPP3O14638 875 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 ASAP2O43150 1006 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 CA3P07451 260 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 SRGAP2CP0DJJ0 459 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 LAMTOR4Q0VGL1 99 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 TFDP1Q14186 410 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 MXD4Q14582 209 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 FAM173BQ6P4H8 233 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 FAM228AQ86W67 206 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 AK8Q96MA6 479 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 FDXACB1Q9BRP7 624 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 SEMA6BQ9H3T3 888 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-234ENST00000497758 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 CLIC4Q9Y696 253 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 MICAL3Q7RTP6 2002 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 SIP14410 1827 aa13.06□□□□□ -0.32
MRPL55-234ENST00000497758 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-234ENST00000497758 CDC25AP30304 524 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 UBA7P41226 1012 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 PHKA2P46019 1235 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 MAEAQ7L5Y9 396 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 RNF149Q8NC42 400 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 TOP1MTQ969P6 601 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-234ENST00000497758 ADAM2Q99965 735 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 XPNPEP1Q9NQW7 623 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 C1orf112Q9NSG2 853 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 MTMR10Q9NXD2 777 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
MRPL55-234ENST00000497758 CSDE1O75534 798 aaKnown RBP13.04□□□□□ -0.32
MRPL55-234ENST00000497758 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-234ENST00000497758 FGFR4P22455 802 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 LONP1P36776 959 aaKnown RBP13.04□□□□□ -0.32
MRPL55-234ENST00000497758 ECM1Q16610 540 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 FAM102BQ5T8I3 360 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 CATSPER4Q7RTX7 472 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 CABP7Q86V35 215 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 LINC01599Q8WXQ3 324 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 CALML4Q96GE6 196 aa13.04□□□□□ -0.32
MRPL55-234ENST00000497758 POLR3FQ9H1D9 316 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-234ENST00000497758 LCHNA4D1U4 455 aa13.03□□□□□ -0.32
MRPL55-234ENST00000497758 SLC26A4O43511 780 aa13.03□□□□□ -0.32
MRPL55-234ENST00000497758 MGEA5O60502 916 aa13.03□□□□□ -0.32
MRPL55-234ENST00000497758 EYA4O95677 639 aa13.03□□□□□ -0.32
MRPL55-234ENST00000497758 SSBP05455 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
MRPL55-234ENST00000497758 CYP11B2P19099 503 aa13.03□□□□□ -0.32
MRPL55-234ENST00000497758 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-234ENST00000497758 ARL2P36404 184 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms