RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SYKP43405 635 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 PTK7Q13308 1070 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 MCM6Q14566 821 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 LARP4BQ92615 738 aaKnown RBP22.27■■□□□ 1.16
CTSD-206ENST00000497544 RNPC3Q96LT9 517 aaKnown RBP22.27■■□□□ 1.16
CTSD-206ENST00000497544 ZNF576Q9H609 170 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 BLOC1S4Q9NUP1 217 aa22.27■■□□□ 1.16
CTSD-206ENST00000497544 REV3LO60673 3130 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 XIRP2A4UGR9 3374 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 USO1O60763 962 aaKnown RBP22.26■■□□□ 1.15
CTSD-206ENST00000497544 GADD45BO75293 160 aaPredicted RBP22.26■■□□□ 1.15
CTSD-206ENST00000497544 C22orf31O95567 290 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 DNM2P50570 870 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 NDUFA8P51970 172 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 UBE2HP62256 183 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 TAF2Q6P1X5 1199 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 SV2BQ7L1I2 683 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 SERINC5Q86VE9 423 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 ZBTB10Q96DT7 871 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 CUEDC2Q9H467 287 aa22.26■■□□□ 1.15
CTSD-206ENST00000497544 DHX33Q9H6R0 707 aaKnown RBP22.26■■□□□ 1.15
CTSD-206ENST00000497544 FAM237AA0A1B0GTK4 181 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 SMIM35A0A1B0GVV1 85 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 SLC12A3P55017 1021 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 FAAP100Q0VG06 881 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 EMC2Q15006 297 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 NAALADL2Q58DX5 795 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 RSPH3Q86UC2 560 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 LRRC71Q8N4P6 559 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 MTRQ99707 1265 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 GOLPH3LQ9H4A5 285 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 ATP6V0A4Q9HBG4 840 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 BMP2KQ9NSY1 1161 aaPredicted RBP22.25■■□□□ 1.15
CTSD-206ENST00000497544 TMEM39AQ9NV64 488 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 USP25Q9UHP3 1055 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 HPSEQ9Y251 543 aa22.25■■□□□ 1.15
CTSD-206ENST00000497544 GAS2O43903 313 aaKnown RBP22.24■■□□□ 1.15
CTSD-206ENST00000497544 RPLP2P05387 115 aaKnown RBP22.24■■□□□ 1.15
CTSD-206ENST00000497544 CLTBP09497 229 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 CYP11B2P19099 503 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 E2F4Q16254 413 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 RINT1Q6NUQ1 792 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 RUFY4Q6ZNE9 571 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 MAEAQ7L5Y9 396 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 SH3RF1Q7Z6J0 888 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 CEP57L1Q8IYX8 460 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 NME8Q8N427 588 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 MCPH1Q8NEM0 835 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 LRRC15Q8TF66 581 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 DNAJB3Q8WWF6 145 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 TCP11Q8WWU5 503 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 CTAGE1Q96RT6 745 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 FAM49AQ9H0Q0 323 aaPredicted RBP22.24■■□□□ 1.15
CTSD-206ENST00000497544 PDLIM7Q9NR12 457 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 ARID2Q68CP9 1835 aa22.24■■□□□ 1.15
CTSD-206ENST00000497544 IGKV6-21A0A0C4DH24 114 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 TRIM43BA6NCK2 446 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 ZNF202O95125 648 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 EPHB4P54760 987 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 BFSP2Q13515 415 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 IER5Q5VY09 327 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 GPBP1Q86WP2 473 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 CCDC155Q8N6L0 562 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 TRIM43Q96BQ3 446 aaPredicted RBP22.23■■□□□ 1.15
CTSD-206ENST00000497544 MAP7D2Q96T17 732 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 GAS2L1Q99501 681 aaPredicted RBP22.23■■□□□ 1.15
CTSD-206ENST00000497544 LRRC27Q9C0I9 530 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 EPHX3Q9H6B9 360 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 SERTAD1Q9UHV2 236 aa22.23■■□□□ 1.15
CTSD-206ENST00000497544 KRT18P05783 430 aaKnown RBP22.22■■□□□ 1.15
CTSD-206ENST00000497544 CLCN3P51790 818 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 AMPD3Q01432 767 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 C1orf186Q6ZWK4 172 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 KIAA0319LQ8IZA0 1049 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 TMEM143Q96AN5 459 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 KCND2Q9NZV8 630 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 SUCLA2Q9P2R7 463 aaPredicted RBP22.22■■□□□ 1.15
CTSD-206ENST00000497544 AKT3Q9Y243 479 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 CHD9Q3L8U1 2897 aa22.22■■□□□ 1.15
CTSD-206ENST00000497544 SLFN14P0C7P3 912 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 THPOP40225 353 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 CCDC85BQ15834 202 aaPredicted RBP22.21■■□□□ 1.15
CTSD-206ENST00000497544 LONRF3Q496Y0 759 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 FAM102BQ5T8I3 360 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 RPAINQ86UA6 219 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 LINC01465Q8N7H1 131 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 CAGE1Q8TC20 777 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 DHX38Q92620 1227 aaKnown RBP22.21■■□□□ 1.15
CTSD-206ENST00000497544 CCDC34Q96HJ3 373 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 RUSC1Q9BVN2 902 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 MAGEF1Q9HAY2 307 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 XPNPEP1Q9NQW7 623 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 LMBRD1Q9NUN5 540 aa22.21■■□□□ 1.15
CTSD-206ENST00000497544 M0QZ92 97 aa22.2■■□□□ 1.14
CTSD-206ENST00000497544 ASAP2O43150 1006 aa22.2■■□□□ 1.14
CTSD-206ENST00000497544 CDC42EP1Q00587 391 aa22.2■■□□□ 1.14
CTSD-206ENST00000497544 FAM160A1Q05DH4 1040 aa22.2■■□□□ 1.14
CTSD-206ENST00000497544 MKRN4PQ13434 485 aaPredicted RBP22.2■■□□□ 1.14
CTSD-206ENST00000497544 FMR1NBQ8N0W7 255 aaPredicted RBP22.2■■□□□ 1.14
CTSD-206ENST00000497544 CNNM3Q8NE01 707 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms