RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NFKBIZQ9BYH8 718 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 SENP6Q9GZR1 1112 aaPredicted RBP21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 RMND1Q9NWS8 449 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 H0YCG3 227 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 TLR3O15455 904 aaKnown RBP21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 TRAK2O60296 914 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 PCBP1Q15365 356 aaKnown RBP eCLIP21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 ZNF410Q86VK4 478 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 IFNLR1Q8IU57 520 aaPredicted RBP21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 FAM126BQ8IXS8 530 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 KIAA0319LQ8IZA0 1049 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 PAWRQ96IZ0 340 aaKnown RBP21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 MAP7D2Q96T17 732 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 REEP2Q9BRK0 252 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 ST6GALNAC4Q9H4F1 302 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 PARVGQ9HBI0 331 aa21.87■■□□□ 1.09
SCAMP3-209ENST00000497470 A0A087WWV3 80 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 TREHO43280 583 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 RHOBTB3O94955 611 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 KRT18P05783 430 aaKnown RBP21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 CYP2C9P11712 490 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 PLS3P13797 630 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 AFMP43652 599 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 ALCAMQ13740 583 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 PTGISQ16647 500 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 FAM47CQ5HY64 1035 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 DAW1Q8N136 415 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 CAGE1Q8TC20 777 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 CTAGE1Q96RT6 745 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 KIAA1468Q9P260 1216 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 SQORQ9Y6N5 450 aa21.86■■□□□ 1.09
SCAMP3-209ENST00000497470 DCDC2CA8MYV0 355 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 HIP1RO75146 1068 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 TBCAO75347 108 aaKnown RBP21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 PARNO95453 639 aaKnown RBP21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 NAMPTP43490 491 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 MKRN4PQ13434 485 aaPredicted RBP21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 CUL4BQ13620 913 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 HIC1Q14526 733 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 COBLL1Q53SF7 1204 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 TRMT1LQ7Z2T5 733 aaKnown RBP21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 CCDC155Q8N6L0 562 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 TRAPPC12Q8WVT3 735 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 IFT74Q96LB3 600 aa21.85■■□□□ 1.09
SCAMP3-209ENST00000497470 PITPNM1O00562 1244 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 KLRC4O43908 158 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 FAM13AO94988 1023 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 RPN1P04843 607 aaKnown RBP21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 SMTNP53814 917 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 IGBP1P78318 339 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 ASIC1P78348 528 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 TFDP1Q14186 410 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 DHX8Q14562 1220 aaKnown RBP21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 FAM26DQ5JW98 314 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 SMARCE1Q969G3 411 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 SH2D3AQ9BRG2 576 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 PANK4Q9NVE7 773 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 SUCLA2Q9P2R7 463 aaPredicted RBP21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 PCDHA5Q9Y5H7 936 aa21.84■■□□□ 1.09
SCAMP3-209ENST00000497470 EN2P19622 333 aaPredicted RBP21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 PPP1R2P41236 205 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 EFNA5P52803 228 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 DMP1Q13316 513 aaPredicted RBP21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 FAM102BQ5T8I3 360 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 DYMQ7RTS9 669 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 METTL13Q8N6R0 699 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 HVCN1Q96D96 273 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 POLR3FQ9H1D9 316 aaPredicted RBP21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 C2orf40Q9H1Z8 148 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 SUGCTQ9HAC7 445 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 NOD1Q9Y239 953 aa21.83■■□□□ 1.09
SCAMP3-209ENST00000497470 B4GALT4O60513 344 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 GLRA2P23416 452 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 BFSP2Q13515 415 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 TRIM71Q2Q1W2 868 aaKnown RBP21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 TPRNQ4KMQ1 711 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 CT47A1Q5JQC4 288 aaPredicted RBP21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 STXBP4Q6ZWJ1 553 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 DIS3LQ8TF46 1054 aaKnown RBP21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 PRPF31Q8WWY3 499 aaKnown RBP21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 STAMQ92783 540 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 INO80BQ9C086 356 aaPredicted RBP21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 TMEM134Q9H6X4 195 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 TMEM63CQ9P1W3 806 aa21.82■■□□□ 1.08
SCAMP3-209ENST00000497470 CENPFP49454 3210 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 KIF20AO95235 890 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 NCKAP1LP55160 1127 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 LAMTOR4Q0VGL1 99 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 COASYQ13057 564 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 PNOCQ13519 176 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 HERC4Q5GLZ8 1057 aaPredicted RBP21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 ODR4Q5SWX8 454 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 CDCA2Q69YH5 1023 aaPredicted RBP21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 SRGAP1Q7Z6B7 1085 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 USP38Q8NB14 1042 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 TMEM143Q96AN5 459 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 FIZ1Q96SL8 496 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 EXOC1Q9NV70 894 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 ARHGAP28Q9P2N2 729 aa21.81■■□□□ 1.08
SCAMP3-209ENST00000497470 EIF3DO15371 548 aaKnown RBP eCLIP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms