RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 POLR3CQ9BUI4 534 aaPredicted RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
HLA-B-254ENST00000497377 AKT3Q9Y243 479 aa12.81□□□□□ -0.36
HLA-B-254ENST00000497377 LOXHD1Q8IVV2 1947 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 IGKV6-21A0A0C4DH24 114 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 STX6O43752 255 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 RPA1P27694 616 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 CLCN3P51790 818 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 WDR5P61964 334 aaKnown RBP12.8□□□□□ -0.36
HLA-B-254ENST00000497377 LRRC71Q8N4P6 559 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
HLA-B-254ENST00000497377 FTHL17Q9BXU8 183 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 ZSCAN16Q9H4T2 348 aaPredicted RBP12.8□□□□□ -0.36
HLA-B-254ENST00000497377 DHX33Q9H6R0 707 aaKnown RBP12.8□□□□□ -0.36
HLA-B-254ENST00000497377 SUGCTQ9HAC7 445 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 MSRAQ9UJ68 235 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 PCDHA11Q9Y5I1 949 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 ARID2Q68CP9 1835 aa12.8□□□□□ -0.36
HLA-B-254ENST00000497377 TMEM150BA6NC51 233 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 GPR182O15218 404 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 GPR32O75388 356 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 AMHP03971 560 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 VTNP04004 478 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 SPATA31C1P0DKV0 1188 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 DNAJB2P25686 324 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 POLGP54098 1239 aaPredicted RBP12.79□□□□□ -0.36
HLA-B-254ENST00000497377 NPEPPSP55786 919 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 TMEM62Q0P6H9 643 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 PAK2Q13177 524 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 DSG2Q14126 1118 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 XKR9Q5GH70 373 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 PTCD2Q8WV60 388 aaKnown RBP12.79□□□□□ -0.36
HLA-B-254ENST00000497377 TCP11Q8WWU5 503 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 NACC1Q96RE7 527 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 LRWD1Q9UFC0 647 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 MTMR6Q9Y217 621 aa12.79□□□□□ -0.36
HLA-B-254ENST00000497377 CCT6AP40227 531 aaKnown RBP12.78□□□□□ -0.36
HLA-B-254ENST00000497377 PBX2P40425 430 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 RARRES1P49788 294 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 NLRP11P59045 1033 aaKnown RBP12.78□□□□□ -0.36
HLA-B-254ENST00000497377 LSM11P83369 360 aaKnown RBP eCLIP12.78□□□□□ -0.36
HLA-B-254ENST00000497377 RESTQ13127 1097 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 KRT79Q5XKE5 535 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 FERMT3Q86UX7 667 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 ZNF410Q86VK4 478 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 HERC6Q8IVU3 1022 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 KCTD17Q8N5Z5 321 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 TIFAQ96CG3 184 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
HLA-B-254ENST00000497377 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
HLA-B-254ENST00000497377 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
HLA-B-254ENST00000497377 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 GBF1Q92538 1859 aa12.78□□□□□ -0.36
HLA-B-254ENST00000497377 GRXCR1A8MXD5 290 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 ASAP2O43150 1006 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 SLC26A4O43511 780 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 MED24O75448 989 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 RPS6KA5O75582 802 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 DGAT1O75907 488 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 EIF4BP23588 611 aaKnown RBP12.77□□□□□ -0.37
HLA-B-254ENST00000497377 CD52P31358 61 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 GPC3P51654 580 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 EMC2Q15006 297 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 SNX29Q8TEQ0 813 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.37
HLA-B-254ENST00000497377 AK8Q96MA6 479 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 SCLT1Q96NL6 688 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 OSMRQ99650 979 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 MTRQ99707 1265 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 SH2D3AQ9BRG2 576 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.37
HLA-B-254ENST00000497377 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.37
HLA-B-254ENST00000497377 ERVK-5Q9HDB9 667 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 PTPRSQ13332 1948 aa12.77□□□□□ -0.37
HLA-B-254ENST00000497377 ZBTB39O15060 712 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 TLL1O43897 1013 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 GJB5O95377 273 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
HLA-B-254ENST00000497377 DEFB103AP81534 67 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 DRP2Q13474 957 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 BECN1Q14457 450 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
HLA-B-254ENST00000497377 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
HLA-B-254ENST00000497377 IL17AQ16552 155 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■□□ 16.5
HLA-B-254ENST00000497377 MYOCDQ8IZQ8 938 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 DEFB123Q8N688 67 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
HLA-B-254ENST00000497377 TMEM40Q8WWA1 233 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms