RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 BRI3BPQ8WY22 251 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 HERVK_113Q902F9 699 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 HDAC2Q92769 488 aaKnown RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 HVCN1Q96D96 273 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 APIPQ96GX9 242 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ABHD8Q96I13 439 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ZNF496Q96IT1 587 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 KREMEN1Q96MU8 473 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 NT5C1BQ96P26 610 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 TSPAN18Q96SJ8 248 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ELF4Q99607 663 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 CGRRF1Q99675 332 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 PTPN18Q99952 460 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 TREX2Q9BQ50 279 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 CORO1BQ9BR76 489 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 SEZ6LQ9BYH1 1024 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 STK33Q9BYT3 514 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 UBE2OQ9C0C9 1292 aaKnown RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 LMAN2LQ9H0V9 348 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 IPPKQ9H8X2 491 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 PLEKHA5Q9HAU0 1116 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 PLSCR4Q9NRQ2 329 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 DNAJC28Q9NX36 388 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 NKIRAS2Q9NYR9 191 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CRIM1Q9NZV1 1036 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 GIMAP2Q9UG22 337 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 TRPC5Q9UL62 973 aaPredicted RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 NSFL1CQ9UNZ2 370 aaKnown RBP2.24□□□□□ -2.05
UBR4-217ENST00000497018 CEP131Q9UPN4 1083 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 CORO2BQ9UQ03 480 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ZNF652Q9Y2D9 606 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 NUB1Q9Y5A7 615 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 MED14O60244 1454 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ATP10AO60312 1499 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 ATP10DQ9P241 1426 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 DEPDC5O75140 1603 aa2.24□□□□□ -2.05
UBR4-217ENST00000497018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.23□□□□□ -2.05
UBR4-217ENST00000497018 ADGRB2O60241 1585 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ERICH3Q5RHP9 1530 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 KDM5DQ9BY66 1539 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ARHGAP23Q9P227 1491 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 A0A087X0M5 115 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 A0A088AWK7 358 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 A0A1B0GX30 115 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ANKRD18BA2A2Z9 1011 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 POM121BA6NF01 834 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 FAM187AA6NFU0 413 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 A6NLC8 198 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 F8W8V4 182 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 H0Y8X5 98 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 H7C1D1 291 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 RBAK-RBAKDNI3L0D1 243 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 STXBP3O00186 592 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 MASP2O00187 686 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 FOXN3O00409 490 aaPredicted RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 AURKAO14965 403 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 NPC1O15118 1278 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 AXIN1O15169 862 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 MEFVO15553 781 aaPredicted RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 HOXC11O43248 304 aaPredicted RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 HTRA2O43464 458 aaPredicted RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 AHCYL1O43865 530 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 MGEA5O60502 916 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ADAM11O75078 769 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 AOC2O75106 756 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 VAMP4O75379 141 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 AMY2AP04746 511 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 POLBP06746 335 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 THP07101 528 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 FAM200BP0CF97 657 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 SRGAP2CP0DJJ0 459 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ATP1A3P13637 1013 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 RAC2P15153 192 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 SLC9A1P19634 815 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 AMY2BP19961 511 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ALAS2P22557 587 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 CTSSP25774 331 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ELF1P32519 619 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 WASP42768 502 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 CTSKP43235 329 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ALDH9A1P49189 494 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 RGS19P49795 217 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 TUBP50607 506 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 NR1H2P55055 460 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 MANFP55145 182 aaKnown RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 HTRA4P83105 476 aaPredicted RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 FOXO4P98177 505 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 IRF9Q00978 393 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ID3Q02535 119 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 TBC1D8BQ0IIM8 1120 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 PRKG1Q13976 671 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 PPP2R5DQ14738 602 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 SEPT2Q15019 361 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 SLC14A2Q15849 920 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 IFI16Q16666 785 aaKnown RBP2.23□□□□□ -2.05
UBR4-217ENST00000497018 KIZQ2M2Z5 673 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 MUM1Q2TAK8 710 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 ZACNQ401N2 412 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 FAM47CQ5HY64 1035 aa2.23□□□□□ -2.05
UBR4-217ENST00000497018 TOR2AQ5JU69 321 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms