RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 MTRQ99707 1265 aa25.33■■□□□ 1.65
CHRD-217ENST00000496527 TTYH1Q9H313 450 aaPredicted RBP25.33■■□□□ 1.65
CHRD-217ENST00000496527 ZSCAN16Q9H4T2 348 aaPredicted RBP25.33■■□□□ 1.65
CHRD-217ENST00000496527 ZNF576Q9H609 170 aa25.33■■□□□ 1.65
CHRD-217ENST00000496527 ERVK-5Q9HDB9 667 aa25.33■■□□□ 1.65
CHRD-217ENST00000496527 DBR1Q9UK59 544 aaKnown RBP25.33■■□□□ 1.65
CHRD-217ENST00000496527 ST3GAL5Q9UNP4 418 aa25.33■■□□□ 1.65
CHRD-217ENST00000496527 VWA3AA6NCI4 1184 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 DGAT1O75907 488 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 PDIA4P13667 645 aaKnown RBP25.32■■□□□ 1.64
CHRD-217ENST00000496527 SF3A1Q15459 793 aaKnown RBP25.32■■□□□ 1.64
CHRD-217ENST00000496527 ZNF410Q86VK4 478 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 FAM228AQ86W67 206 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 PSPC1Q8WXF1 523 aaKnown RBP25.32■■□□□ 1.64
CHRD-217ENST00000496527 TOP1MTQ969P6 601 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 RAD9AQ99638 391 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 GCOM2Q9BZD3 368 aaPredicted RBP25.32■■□□□ 1.64
CHRD-217ENST00000496527 ATP6V0A4Q9HBG4 840 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 MTMR10Q9NXD2 777 aa25.32■■□□□ 1.64
CHRD-217ENST00000496527 LOXHD1Q8IVV2 1947 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 PP2D1A8MPX8 630 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 UPP2O95045 317 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 DARSP14868 501 aaKnown RBP25.31■■□□□ 1.64
CHRD-217ENST00000496527 PPP2R2DQ66LE6 453 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 PRPF31Q8WWY3 499 aaKnown RBP25.31■■□□□ 1.64
CHRD-217ENST00000496527 TMX1Q9H3N1 280 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 KIAA1024Q9UPX6 916 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 COL4A3BPQ9Y5P4 624 aa25.31■■□□□ 1.64
CHRD-217ENST00000496527 A0A087WZ62 844 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 CA3P07451 260 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 CDC25AP30304 524 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 ECM1Q16610 540 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 FAM173BQ6P4H8 233 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 RTN4RL1Q86UN2 441 aaPredicted RBP25.3■■□□□ 1.64
CHRD-217ENST00000496527 KSR1Q8IVT5 923 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 NLRP4Q96MN2 994 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 FDXACB1Q9BRP7 624 aaPredicted RBP25.3■■□□□ 1.64
CHRD-217ENST00000496527 TSPYL2Q9H2G4 693 aaPredicted RBP25.3■■□□□ 1.64
CHRD-217ENST00000496527 XPNPEP1Q9NQW7 623 aa25.3■■□□□ 1.64
CHRD-217ENST00000496527 DENND3A2RUS2 1198 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 ARHGEF35A5YM69 484 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 ASAP2O43150 1006 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 USO1O60763 962 aaKnown RBP25.29■■□□□ 1.64
CHRD-217ENST00000496527 LINC01599Q8WXQ3 324 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 INO80BQ9C086 356 aaPredicted RBP25.29■■□□□ 1.64
CHRD-217ENST00000496527 DDX19AQ9NUU7 478 aaKnown RBP25.29■■□□□ 1.64
CHRD-217ENST00000496527 INSL6Q9Y581 213 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 CLIC4Q9Y696 253 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 GBF1Q92538 1859 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 PTPRSQ13332 1948 aa25.29■■□□□ 1.64
CHRD-217ENST00000496527 LAMA2P24043 3122 aaKnown RBP25.29■■□□□ 1.64
CHRD-217ENST00000496527 LAMTOR4Q0VGL1 99 aa25.28■■□□□ 1.64
CHRD-217ENST00000496527 ADAM2Q99965 735 aa25.28■■□□□ 1.64
CHRD-217ENST00000496527 ARID2Q68CP9 1835 aa25.28■■□□□ 1.64
CHRD-217ENST00000496527 SZT2Q5T011 3432 aa25.27■■□□□ 1.64
CHRD-217ENST00000496527 SRGAP2CP0DJJ0 459 aa25.27■■□□□ 1.64
CHRD-217ENST00000496527 MXD4Q14582 209 aaPredicted RBP25.27■■□□□ 1.64
CHRD-217ENST00000496527 ZRSR1Q15695 479 aaKnown RBP25.27■■□□□ 1.64
CHRD-217ENST00000496527 PADI6Q6TGC4 694 aa25.27■■□□□ 1.64
CHRD-217ENST00000496527 AK8Q96MA6 479 aa25.27■■□□□ 1.64
CHRD-217ENST00000496527 YME1L1Q96TA2 773 aa25.27■■□□□ 1.64
CHRD-217ENST00000496527 MMTAG2Q9BU76 263 aaKnown RBP25.27■■□□□ 1.64
CHRD-217ENST00000496527 DNM3Q9UQ16 869 aa25.27■■□□□ 1.64
CHRD-217ENST00000496527 MGEA5O60502 916 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 CSDE1O75534 798 aaKnown RBP25.26■■□□□ 1.63
CHRD-217ENST00000496527 SLC34A2O95436 690 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 ZSCAN20P17040 1043 aaPredicted RBP25.26■■□□□ 1.63
CHRD-217ENST00000496527 FGFR4P22455 802 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 SFPQP23246 707 aaKnown RBP eCLIP25.26■■□□□ 1.63
CHRD-217ENST00000496527 HTRA4P83105 476 aaPredicted RBP25.26■■□□□ 1.63
CHRD-217ENST00000496527 CEBPZQ03701 1054 aaKnown RBP25.26■■□□□ 1.63
CHRD-217ENST00000496527 GRIN2CQ14957 1233 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 MCPH1Q8NEM0 835 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 GUCD1Q96NT3 240 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 BHMT2Q9H2M3 363 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 IFT122Q9HBG6 1241 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 RGS18Q9NS28 235 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 C1orf112Q9NSG2 853 aa25.26■■□□□ 1.63
CHRD-217ENST00000496527 LCHNA4D1U4 455 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 STAG3L1P0CL83 205 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 ARL2P36404 184 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 TAP1Q03518 808 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 TFDP1Q14186 410 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 PTPAQ15257 358 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 FOXD4L5Q5VV16 416 aaPredicted RBP25.25■■□□□ 1.63
CHRD-217ENST00000496527 MAEAQ7L5Y9 396 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 RNF149Q8NC42 400 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 FOXD4L4Q8WXT5 416 aaPredicted RBP25.25■■□□□ 1.63
CHRD-217ENST00000496527 CDK5RAP3Q96JB5 506 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 CDX2Q99626 313 aaPredicted RBP25.25■■□□□ 1.63
CHRD-217ENST00000496527 POLR3FQ9H1D9 316 aaPredicted RBP25.25■■□□□ 1.63
CHRD-217ENST00000496527 RNF216Q9NWF9 866 aaPredicted RBP25.25■■□□□ 1.63
CHRD-217ENST00000496527 LRFN2Q9ULH4 789 aa25.25■■□□□ 1.63
CHRD-217ENST00000496527 ZSCAN22P10073 491 aaPredicted RBP25.24■■□□□ 1.63
CHRD-217ENST00000496527 CYP11B2P19099 503 aa25.24■■□□□ 1.63
CHRD-217ENST00000496527 IBSPP21815 317 aaPredicted RBP25.24■■□□□ 1.63
CHRD-217ENST00000496527 LONP1P36776 959 aaKnown RBP25.24■■□□□ 1.63
CHRD-217ENST00000496527 SARSP49591 514 aaKnown RBP25.24■■□□□ 1.63
CHRD-217ENST00000496527 BECN1Q14457 450 aa25.24■■□□□ 1.63
CHRD-217ENST00000496527 DSC3Q14574 896 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms