RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SLC24A5Q71RS6 500 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.06■□□□□ 0.16
VTI1A-209ENST00000496445 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 HAS1Q92839 578 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 P2RX5Q93086 422 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
VTI1A-209ENST00000496445 IGKV6-21A0A0C4DH24 114 aa16.05■□□□□ 0.16
VTI1A-209ENST00000496445 CCNT1O60563 726 aaKnown RBP16.05■□□□□ 0.16
VTI1A-209ENST00000496445 JAK2O60674 1132 aa16.05■□□□□ 0.16
VTI1A-209ENST00000496445 ITGB1P05556 798 aa16.05■□□□□ 0.16
VTI1A-209ENST00000496445 GCFC2P16383 781 aaKnown RBP16.05■□□□□ 0.16
VTI1A-209ENST00000496445 EIF4BP23588 611 aaKnown RBP16.05■□□□□ 0.16
VTI1A-209ENST00000496445 ANO5Q75V66 913 aa16.05■□□□□ 0.16
VTI1A-209ENST00000496445 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
VTI1A-209ENST00000496445 WRAP73Q9P2S5 460 aaPredicted RBP16.05■□□□□ 0.16
VTI1A-209ENST00000496445 PCDHB7Q9Y5E2 793 aa16.05■□□□□ 0.16
VTI1A-209ENST00000496445 TBKBP1A7MCY6 615 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 H3BQ06 376 aaPredicted RBP16.04■□□□□ 0.16
VTI1A-209ENST00000496445 FGFR1P11362 822 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 DARSP14868 501 aaKnown RBP16.04■□□□□ 0.16
VTI1A-209ENST00000496445 IL9P15248 144 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 FGFR4P22455 802 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 KRT2P35908 639 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 NEK4P51957 841 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 FAM189BP81408 668 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 HYAL1Q12794 435 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 KLHL23Q8NBE8 558 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 SPPL3Q8TCT6 385 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 WASF1Q92558 559 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 RNF19AQ9NV58 838 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 TMEM161AQ9NX61 479 aa16.04■□□□□ 0.16
VTI1A-209ENST00000496445 TBX3O15119 743 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 GTF2F1P35269 517 aaKnown RBP eCLIP16.03■□□□□ 0.16
VTI1A-209ENST00000496445 IRS1P35568 1242 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 LTBRP36941 435 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 PSMC5P62195 406 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 CTC1Q2NKJ3 1217 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 NAALADL2Q58DX5 795 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 ZNF710Q8N1W2 664 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
VTI1A-209ENST00000496445 ELAC1Q9H777 363 aaKnown RBP16.03■□□□□ 0.16
VTI1A-209ENST00000496445 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 WNT7AO00755 349 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 MAFO75444 373 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-209ENST00000496445 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.16
VTI1A-209ENST00000496445 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
VTI1A-209ENST00000496445 FOSBP53539 338 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-209ENST00000496445 ADGRD2Q7Z7M1 963 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
VTI1A-209ENST00000496445 POF1BQ8WVV4 589 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 KHSRPQ92945 711 aaKnown RBP eCLIP16.02■□□□□ 0.16
VTI1A-209ENST00000496445 SCLT1Q96NL6 688 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 LXNQ9BS40 222 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 CWH43Q9H720 699 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 CD320Q9NPF0 282 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 PCDHGC5Q9Y5F6 944 aa16.02■□□□□ 0.16
VTI1A-209ENST00000496445 TRIOO75962 3097 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 GRXCR2A6NFK2 248 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 TBX10O75333 385 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 ATF7P17544 494 aaPredicted RBP16.01■□□□□ 0.15
VTI1A-209ENST00000496445 NPEPPSP55786 919 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 DLX2Q07687 328 aaPredicted RBP16.01■□□□□ 0.15
VTI1A-209ENST00000496445 ECHDC2Q86YB7 292 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
VTI1A-209ENST00000496445 BRMS1Q9HCU9 246 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 CYP26B1Q9NR63 512 aa16.01■□□□□ 0.15
VTI1A-209ENST00000496445 TYW1Q9NV66 732 aaKnown RBP16.01■□□□□ 0.15
VTI1A-209ENST00000496445 A0A087WZ62 844 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 BTBD18B2RXH4 712 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 LINC01565O15544 149 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 P4HBP07237 508 aaKnown RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 EPHA7Q15375 998 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 CLLU1OSQ5K130 101 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 NCAPH2Q6IBW4 605 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 LRRC55Q6ZSA7 311 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 EP400NLQ6ZTU2 488 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 ZNF598Q86UK7 904 aaKnown RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 RHPN2Q8IUC4 686 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 KSR1Q8IVT5 923 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 FAM178BQ8IXR5 827 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 DIS3L2Q8IYB7 885 aaKnown RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 COLGALT1Q8NBJ5 622 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 DYDC2Q96IM9 177 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 FDXACB1Q9BRP7 624 aaPredicted RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 TMEM117Q9H0C3 514 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 RGL1Q9NZL6 768 aa16■□□□□ 0.15
VTI1A-209ENST00000496445 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
VTI1A-209ENST00000496445 ZSCAN20P17040 1043 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-209ENST00000496445 SPOUT1Q5T280 376 aaKnown RBP15.99■□□□□ 0.15
VTI1A-209ENST00000496445 ZNF410Q86VK4 478 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms