RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PTDSS1P48651 473 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 LSAMPQ13449 338 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 Q4G0T1 1027 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 TMEM67Q5HYA8 995 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 POTEEQ6S8J3 1075 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 LDHAL6AQ6ZMR3 332 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 C7orf43Q8WVR3 580 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 MTRQ99707 1265 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 RNF26Q9BY78 433 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 ZNF277Q9NRM2 450 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 CNNM1Q9NRU3 951 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 KLHL14Q9P2G3 628 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 NKX1-2Q9UD57 310 aaPredicted RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 SIK3Q9Y2K2 1263 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 ATP8B3O60423 1300 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 TRIM49BA6NDI0 452 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 MAP3K13O43283 966 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 HNRNPCL1O60812 293 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 FAM200BP0CF97 657 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 RPL13P26373 211 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 KRT2P35908 639 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 LONP1P36776 959 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 USP11P51784 963 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 GPSM2P81274 684 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 CNGA2Q16280 664 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 RTN1Q16799 776 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 ARL6IP4Q66PJ3 421 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 LRRC43Q8N309 656 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 KIF2BQ8N4N8 673 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 SMC1BQ8NDV3 1235 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 NEK9Q8TD19 979 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 GATA6Q92908 595 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 NUDCD1Q96RS6 583 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 FMO2Q99518 471 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 DUSP9Q99956 384 aaKnown RBP9.8□□□□□ -0.84
HPS4-217ENST00000496385 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.8□□□□□ -0.841e-9■■□□□ 14.2
HPS4-217ENST00000496385 NEUROG2Q9H2A3 272 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 MAGEF1Q9HAY2 307 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 ETNK1Q9HBU6 452 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 USP20Q9Y2K6 914 aa9.8□□□□□ -0.84
HPS4-217ENST00000496385 NFKBIEO00221 500 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 BBOX1O75936 387 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 TJP3O95049 919 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 SCNN1BP51168 640 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 PRELPP51888 382 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 CACNA2D1P54289 1103 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 DRG2P55039 364 aaKnown RBP9.79□□□□□ -0.84
HPS4-217ENST00000496385 ALX1Q15699 326 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 SLC9C1Q4G0N8 1177 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 RASGEF1CQ8N431 466 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 FITM2Q8N6M3 262 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 P2RX5Q93086 422 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 ROPN1BQ9BZX4 212 aaPredicted RBP9.79□□□□□ -0.84
HPS4-217ENST00000496385 MAF1Q9H063 256 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 ROPN1Q9HAT0 212 aaPredicted RBP9.79□□□□□ -0.84
HPS4-217ENST00000496385 PREBQ9HCU5 417 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 ATP6V0A2Q9Y487 856 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 MYH2Q9UKX2 1941 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 SIGLEC16A6NMB1 481 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 TRAFD1O14545 582 aaPredicted RBP9.79□□□□□ -0.84
HPS4-217ENST00000496385 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 GPAA1O43292 621 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 BUB1O43683 1085 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 CIAO1O76071 339 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 FGFR1OPO95684 399 aaKnown RBP9.79□□□□□ -0.84
HPS4-217ENST00000496385 IDO1P14902 403 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 RXRAP19793 462 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 CLUL1Q15846 466 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 SLC4A8Q2Y0W8 1093 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 FOXB2Q5VYV0 432 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 DENND2CQ68D51 928 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 MFSD5Q6N075 450 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 PDXDC1Q6P996 788 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 ANKS1AQ92625 1134 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
HPS4-217ENST00000496385 OLFM3Q96PB7 478 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 ZMYND12Q9H0C1 365 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 ZCWPW1Q9H0M4 648 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 MINPP1Q9UNW1 487 aa9.79□□□□□ -0.84
HPS4-217ENST00000496385 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 DAPK3O43293 454 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 SERPING1P05155 500 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 ATP5DP30049 168 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 PMS1P54277 932 aaKnown RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 EHHADHQ08426 723 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 DPP8Q6V1X1 898 aaPredicted RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 ATG9AQ7Z3C6 839 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 LONP2Q86WA8 852 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 WDR66Q8TBY9 1149 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 ZNF526Q8TF50 670 aaPredicted RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 BAP1Q92560 729 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 UTP4Q969X6 686 aaKnown RBP9.78□□□□□ -0.84
HPS4-217ENST00000496385 MAML3Q96JK9 1138 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 PHF20Q9BVI0 1012 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 SPATA16Q9BXB7 569 aa9.78□□□□□ -0.84
HPS4-217ENST00000496385 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.78□□□□□ -0.84
HPS4-217ENST00000496385 DPH5Q9H2P9 285 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms