RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 GINS2Q9Y248 185 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 COL4A3BPQ9Y5P4 624 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 SQORQ9Y6N5 450 aa18.99■□□□□ 0.63
HDAC6-235ENST00000495515 WDR81Q562E7 1941 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 CRYBB1P53674 252 aaPredicted RBP18.98■□□□□ 0.63
HDAC6-235ENST00000495515 SLC12A3P55017 1021 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 NLRP11P59045 1033 aaKnown RBP18.98■□□□□ 0.63
HDAC6-235ENST00000495515 MGAT3Q09327 533 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 DRP2Q13474 957 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 TFDP1Q14186 410 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 ODR4Q5SWX8 454 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 FAM102BQ5T8I3 360 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 RINT1Q6NUQ1 792 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 TRAF7Q6Q0C0 670 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 SV2BQ7L1I2 683 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 MAEAQ7L5Y9 396 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 ZNF410Q86VK4 478 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 PRPF31Q8WWY3 499 aaKnown RBP18.98■□□□□ 0.63
HDAC6-235ENST00000495515 NLRP7Q8WX94 980 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 KIFAP3Q92845 792 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 LRRC27Q9C0I9 530 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 POLR3FQ9H1D9 316 aaPredicted RBP18.98■□□□□ 0.63
HDAC6-235ENST00000495515 IL23AQ9NPF7 189 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 BLOC1S4Q9NUP1 217 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 KCNH3Q9ULD8 1083 aa18.98■□□□□ 0.63
HDAC6-235ENST00000495515 GPR32O75388 356 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 KRT18P05783 430 aaKnown RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 GUCY2CP25092 1073 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 ARL2P36404 184 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 GPC3P51654 580 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 LAMTOR4Q0VGL1 99 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 DHX8Q14562 1220 aaKnown RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 MCM6Q14566 821 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 PPP2R5AQ15172 486 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 KIZQ2M2Z5 673 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 PSRC1Q6PGN9 363 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 FAM43BQ6ZT52 329 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 C1orf186Q6ZWK4 172 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 GPBP1Q86WP2 473 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 MRPS27Q92552 414 aaKnown RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 DRC1Q96MC2 740 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 GCOM2Q9BZD3 368 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 INO80BQ9C086 356 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-235ENST00000495515 MAGEF1Q9HAY2 307 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 KCNG1Q9UIX4 513 aa18.97■□□□□ 0.63
HDAC6-235ENST00000495515 POLR2DO15514 142 aaKnown RBP18.96■□□□□ 0.63
HDAC6-235ENST00000495515 CXCL10P02778 98 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 ACTN1P12814 892 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 AMPD3Q01432 767 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 FBXO47Q5MNV8 452 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 DEFB128Q7Z7B8 93 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 DHX58Q96C10 678 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 IFT74Q96LB3 600 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 NLRP4Q96MN2 994 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 PPP1R16BQ96T49 567 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 RUSC1Q9BVN2 902 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 ADAMTS10Q9H324 1103 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 USP25Q9UHP3 1055 aa18.96■□□□□ 0.63
HDAC6-235ENST00000495515 TRIP12Q14669 1992 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-235ENST00000495515 A0A087X0B3 334 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 A0A1B0GVL5 298 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 NBNO60934 754 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 GHRP10912 638 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 PFKFB1P16118 471 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 EIF4BP23588 611 aaKnown RBP18.95■□□□□ 0.62
HDAC6-235ENST00000495515 PHKA2P46019 1235 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 POU5F1BQ06416 359 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 MBTPS1Q14703 1052 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 NAALADL2Q58DX5 795 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 TSHZ1Q6ZSZ6 1077 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 CEP57L1Q8IYX8 460 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 FSIP1Q8NA03 581 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 SEPT8Q92599 483 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 APBB2Q92870 758 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 CCDC34Q96HJ3 373 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 OSMRQ99650 979 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 GDF15Q99988 308 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 UBE2OQ9C0C9 1292 aaKnown RBP18.95■□□□□ 0.62
HDAC6-235ENST00000495515 MTIF3Q9H2K0 278 aaKnown RBP18.95■□□□□ 0.62
HDAC6-235ENST00000495515 TNMDQ9H2S6 317 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 C17orf75Q9HAS0 396 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 GPRC5CQ9NQ84 441 aa18.95■□□□□ 0.62
HDAC6-235ENST00000495515 A0A087WZ62 844 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 GPR182O15218 404 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 HIP1RO75146 1068 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 RPS6KA5O75582 802 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 SRGAP2CP0DJJ0 459 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 SYKP43405 635 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 PAK2Q13177 524 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 LPIN1Q14693 890 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 E2F4Q16254 413 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 TPRNQ4KMQ1 711 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 CNKSR3Q6P9H4 555 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 TMEM87AQ8NBN3 555 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 RNF149Q8NC42 400 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 LRRC15Q8TF66 581 aa18.94■□□□□ 0.62
HDAC6-235ENST00000495515 FDXACB1Q9BRP7 624 aaPredicted RBP18.94■□□□□ 0.62
HDAC6-235ENST00000495515 IFIH1Q9BYX4 1025 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms