RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	MAPK8IP1	Q9UQF2	711 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	PTCH2	Q9Y6C5	1203 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	MGAM	O43451	1857 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	NRCAM	Q92823	1304 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	SYNRG	Q9UMZ2	1314 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	IGKV6-21	A0A0C4DH24	114 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	ASAP2	O43150	1006 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	GCNT3	O95395	438 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	FGFR1OP	O95684	399 aa	Known RBP	10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	GNAT1	P11488	350 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	CST5	P28325	142 aa	Predicted RBP	10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	ARL2	P36404	184 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	PPFIA1	Q13136	1202 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	MFSD10	Q14728	455 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	BMT2	Q1RMZ1	405 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	KIAA0753	Q2KHM9	967 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	CENPP	Q6IPU0	288 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	PPP4R3CP	Q6ZMV5	832 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	EPM2AIP1	Q7L775	607 aa	Predicted RBP	10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	ZNF507	Q8TCN5	953 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	NOC3L	Q8WTT2	800 aa	Known RBP	10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	P2RX5	Q93086	422 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	HPS3	Q969F9	1004 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	LENG1	Q96BZ8	264 aa	Predicted RBP	10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	HVCN1	Q96D96	273 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	MTG1	Q9BT17	334 aa	Predicted RBP	10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	TMEM206	Q9H813	350 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	XPNPEP1	Q9NQW7	623 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	TBC1D7	Q9P0N9	293 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	CTNND2	Q9UQB3	1225 aa		10.19	□□□□□ -0.78
PCDH15-223	ENST00000495484	MCM3AP	O60318	1980 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	CASP8AP2	Q9UKL3	1982 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	PHLPP2	Q6ZVD8	1323 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	ZBTB42	B2RXF5	422 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	HAS3	O00219	553 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	ADAMTS4	O75173	837 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	CABYR	O75952	493 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	PSEN2	P49810	448 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	PEX3	P56589	373 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	PURA	Q00577	322 aa	Known RBP	10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	CDC42EP1	Q00587	391 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	BEX3	Q00994	111 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	KNOP1	Q1ED39	458 aa	Known RBP	10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	KLHDC9	Q8NEP7	349 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	GOLGA5	Q8TBA6	731 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	SCFD1	Q8WVM8	642 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	PSPC1	Q8WXF1	523 aa	Known RBP	10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	KAT2B	Q92831	832 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	KCNN1	Q92952	543 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	GPRC5C	Q9NQ84	441 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	KMT5A	Q9NQR1	393 aa		10.18	□□□□□ -0.78
PCDH15-223	ENST00000495484	CCDC169	A6NNP5	214 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484		K7ENM7	598 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	PDXK	O00764	312 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	C22orf31	O95567	290 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	PGK1	P00558	417 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	KLRC1	P26715	233 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	NAMPT	P43490	491 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	NPTX2	P47972	431 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	NCKAP1L	P55160	1127 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	SNRPF	P62306	86 aa	Known RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	GTF2B	Q00403	316 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	TFDP1	Q14186	410 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	NCAPH	Q15003	741 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	LRRC41	Q15345	812 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	GRIK4	Q16099	956 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	PKN2	Q16513	984 aa	Known RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	EFCAB12	Q6NXP0	572 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	HAUS6	Q7Z4H7	955 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	ZNF710	Q8N1W2	664 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	C7orf31	Q8N865	590 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	ARRDC4	Q8NCT1	418 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	TMEM143	Q96AN5	459 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	ACCS	Q96QU6	501 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	FIZ1	Q96SL8	496 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	TSEN34	Q9BSV6	310 aa	Known RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	SUGCT	Q9HAC7	445 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	POLD4	Q9HCU8	107 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	CGN	Q9P2M7	1197 aa	Known RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	EXOC7	Q9UPT5	735 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	NFE2L3	Q9Y4A8	694 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	CALU	O43852	315 aa	Predicted RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	SMIM10L2A	P0DMW4	78 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	SMIM10L2B	P0DMW5	78 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	MYB	P10242	640 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	NMT1	P30419	496 aa	Known RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	CTCF	P49711	727 aa	Predicted RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	EFNA5	P52803	228 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	STX17	P56962	302 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	IGBP1	P78318	339 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	POU5F1B	Q06416	359 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	EDRF1	Q3B7T1	1238 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	SLC9C1	Q4G0N8	1177 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	TTI2	Q6NXR4	508 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	MTHFD1L	Q6UB35	978 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	HS2ST1	Q7LGA3	356 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	CTU1	Q7Z7A3	348 aa	Known RBP	10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	FAM114A1	Q8IWE2	563 aa		10.17	□□□□□ -0.78
PCDH15-223	ENST00000495484	CSGALNACT2	Q8N6G5	542 aa		10.17	□□□□□ -0.78

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