RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 USP17L15C9J2P7 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L13C9JLJ4 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L11C9JVI0 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L18D6R9N7 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L22D6RA61 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L17D6RBQ6 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L19D6RCP7 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L20D6RJB6 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 G3V3G9 751 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 TBX3O15119 743 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 AKAP3O75969 853 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 FGGP02679 453 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 NR3C1P04150 777 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 DRG2P55039 364 aaKnown RBP12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L24Q0WX57 530 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 SFR1Q86XK3 245 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 GIMAP7Q8NHV1 300 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 ATP8B4Q8TF62 1192 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
TRIM2-209ENST00000494872 SLC35C1Q96A29 364 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 PGM2Q96G03 612 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 ANO3Q9BYT9 981 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 GCNT4Q9P109 453 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 MCM8Q9UJA3 840 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 DNM3Q9UQ16 869 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 DAAM1Q9Y4D1 1078 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.34
TRIM2-209ENST00000494872 DDX3YO15523 660 aaKnown RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 RPA1P27694 616 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 HOXD13P35453 343 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 PPATQ06203 517 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 AP3B2Q13367 1082 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 DHX34Q14147 1143 aaKnown RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 NBPF9Q3BBW0 867 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 DUPD1Q68J44 220 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 ERP44Q9BS26 406 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 CELF4Q9BZC1 486 aaKnown RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 DPH5Q9H2P9 285 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 GREB1LQ9C091 1923 aaPredicted RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 POTEFA5A3E0 1075 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 DCDC2CA8MYV0 355 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 ASAP2O43150 1006 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 BUB1BO60566 1050 aaPredicted RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 SLC8A1P32418 973 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 GBP1P32455 592 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 SOX5P35711 763 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 CRKP46108 304 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 DR1Q01658 176 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 NFIL3Q16649 462 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 PTPROQ16827 1216 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 TCERG1LQ5VWI1 586 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 CATSPER3Q86XQ3 398 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 KCTD17Q8N5Z5 321 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 CCDC197Q8NCU1 140 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 HVCN1Q96D96 273 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 PABPC3Q9H361 631 aaKnown RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 ZDHHC18Q9NUE0 388 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
TRIM2-209ENST00000494872 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
TRIM2-209ENST00000494872 PHF20L1A8MW92 1017 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 GSTA1P08263 222 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 NPR1P16066 1061 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 NFIAQ12857 509 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 ITIH4Q14624 930 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 PLS1Q14651 629 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 DNAAF5Q86Y56 855 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 LNX1Q8TBB1 728 aaPredicted RBP12.88□□□□□ -0.35
TRIM2-209ENST00000494872 SLC35G2Q8TBE7 412 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 NEK9Q8TD19 979 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 STK33Q9BYT3 514 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 HAUS2Q9NVX0 235 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 ASTN1O14525 1302 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 CCT8L1PA6NM43 557 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
TRIM2-209ENST00000494872 MGRN1O60291 552 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 EVI5O60447 810 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
TRIM2-209ENST00000494872 TRIM37O94972 964 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 HSPA6P17066 643 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 STAT3P40763 770 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 MMP13P45452 471 aa12.88□□□□□ -0.35
TRIM2-209ENST00000494872 PMS2P54278 862 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms