RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 KCNA1Q09470 495 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 GRB14Q14449 540 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 FIGNQ5HY92 759 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-245ENST00000494862 PLEKHH3Q7Z736 793 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 FBXO16Q8IX29 292 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-245ENST00000494862 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
HDLBP-245ENST00000494862 CPLX3Q8WVH0 158 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 HVCN1Q96D96 273 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 PCYT2Q99447 389 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 SH2D3AQ9BRG2 576 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 NIFKQ9BYG3 293 aaKnown RBP12.63□□□□□ -0.39
HDLBP-245ENST00000494862 GBP3Q9H0R5 595 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 ATP6V0A4Q9HBG4 840 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 VTA1Q9NP79 307 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 GPRC5CQ9NQ84 441 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 NRBP2Q9NSY0 501 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 DMAC2Q9NW81 257 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 CGNQ9P2M7 1197 aaKnown RBP12.63□□□□□ -0.39
HDLBP-245ENST00000494862 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 CAPN11Q9UMQ6 739 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 SIK3Q9Y2K2 1263 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
HDLBP-245ENST00000494862 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
HDLBP-245ENST00000494862 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 RBM47A0AV96 593 aaKnown RBP12.62□□□□□ -0.39
HDLBP-245ENST00000494862 RASSF10A6NK89 507 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 CCP110O43303 1012 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 LGR5O75473 907 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 SMTNP53814 917 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 PEX3P56589 373 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 ARMCX2Q7L311 632 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 TRMT1LQ7Z2T5 733 aaKnown RBP12.62□□□□□ -0.39
HDLBP-245ENST00000494862 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 SLC9A9Q8IVB4 645 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 SYCP3Q8IZU3 236 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 TMEM174Q8WUU8 243 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 PCMTD1Q96MG8 357 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-245ENST00000494862 GPR20Q99678 358 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 NTPCRQ9BSD7 190 aaKnown RBP12.62□□□□□ -0.39
HDLBP-245ENST00000494862 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 XPNPEP1Q9NQW7 623 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 AGPAT3Q9NRZ7 376 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 ARMCX3Q9UH62 379 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-245ENST00000494862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDLBP-245ENST00000494862 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
HDLBP-245ENST00000494862 A0A1W2PQJ5 194 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 SLC15A5A6NIM6 579 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 CLIC2O15247 247 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 SLC10A3P09131 477 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 KRT9P35527 623 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
HDLBP-245ENST00000494862 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-245ENST00000494862 STAT5BP51692 787 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 INHBEP58166 350 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-245ENST00000494862 MTERF2Q49AM1 385 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-245ENST00000494862 MAMDC4Q6UXC1 1216 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 HAUS6Q7Z4H7 955 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 SAPCD2Q86UD0 394 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 TMTC1Q8IUR5 882 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 KSR1Q8IVT5 923 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 DHX37Q8IY37 1157 aaKnown RBP12.61□□□□□ -0.39
HDLBP-245ENST00000494862 OR8K1Q8NGG5 319 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 EDEM3Q9BZQ6 932 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 AZI2Q9H6S1 392 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 EXOC7Q9UPT5 735 aa12.61□□□□□ -0.39
HDLBP-245ENST00000494862 LUC7L2Q9Y383 392 aaKnown RBP12.61□□□□□ -0.39
HDLBP-245ENST00000494862 TRPM7Q96QT4 1865 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 H0YCG3 227 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 RNF225M0QZC1 329 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■□ 19.5
HDLBP-245ENST00000494862 NOP56O00567 594 aaKnown RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 SLC16A4O15374 487 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 AKAP3O75969 853 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TRIM21P19474 475 aaKnown RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 ABCD1P33897 745 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 RFC5P40937 340 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 NPTX2P47972 431 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 KLK7P49862 253 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 POLGP54098 1239 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 ZBED6P86452 979 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 EMC2Q15006 297 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TARBP2Q15633 366 aaKnown RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
HDLBP-245ENST00000494862 TAPT1Q6NXT6 567 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 PLPPR4Q7Z2D5 763 aa12.6□□□□□ -0.39
HDLBP-245ENST00000494862 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms