RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 CYP26C1Q6V0L0 522 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 HS2ST1Q7LGA3 356 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 GOLGA5Q8TBA6 731 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 MS4A4AQ96JQ5 239 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 PCMTD1Q96MG8 357 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 TSPYL1Q9H0U9 437 aa20.31■□□□□ 0.84
TSPAN4-212ENST00000494815 CCDC151A5D8V7 595 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 SOWAHDA6NJG2 315 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 RASSF10A6NK89 507 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 ZNF862O60290 1169 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 ATG7O95352 703 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 CAPN2P17655 700 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 ZBED6P86452 979 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 TSR1Q2NL82 804 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 SWSAP1Q6NVH7 229 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 SEPT14Q6ZU15 432 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 MMP19Q99542 508 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 DESI2Q9BSY9 194 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 METTL14Q9HCE5 456 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 ZCCHC17Q9NP64 241 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 MYH11P35749 1972 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 IGSF9BQ9UPX0 1349 aa20.3■□□□□ 0.84
TSPAN4-212ENST00000494815 LOC102724159A0A0B4J2E5 919 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 STBD1O95210 358 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 CCDC175P0C221 793 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 BRD3Q15059 726 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 PWP2Q15269 919 aaKnown RBP20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 CCDC60Q8IWA6 550 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 ST6GALNAC4Q9H4F1 302 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 ARMCX3Q9UH62 379 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 TMEM150BA6NC51 233 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 KLK7P49862 253 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 NPEPPSP55786 919 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 NEDD9Q14511 834 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 PLA2G4FQ68DD2 849 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 CYFIP1Q7L576 1253 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 C2orf69Q8N8R5 385 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 R3HDMLQ9H3Y0 253 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 RRAGCQ9HB90 399 aa20.29■□□□□ 0.84
TSPAN4-212ENST00000494815 K7ENM7 598 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 EPB41P11171 864 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 UBA1P22314 1058 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 SP4Q02446 784 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 LONRF2Q1L5Z9 754 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 RAD9BQ6WBX8 426 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 MAEAQ7L5Y9 396 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 SMCR8Q8TEV9 937 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 SYNGAP1Q96PV0 1343 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 AKAP3O75969 853 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 CYP2C8P10632 490 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 CCNA1P78396 465 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 PRKCEQ02156 737 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 MEA1Q16626 185 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 XKR3Q5GH77 459 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 KCNV1Q6PIU1 500 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 CEP170P1Q96L14 293 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 FGD4Q96M96 766 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 MKNK1Q9BUB5 465 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 EDEM3Q9BZQ6 932 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 TMEM206Q9H813 350 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 C17orf75Q9HAS0 396 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 PSD3Q9NYI0 1048 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 WDR81Q562E7 1941 aa20.28■□□□□ 0.84
TSPAN4-212ENST00000494815 CCL15-CCL14A0A0B4J2E2 113 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 PDHXO00330 501 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 PGK2P07205 417 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 MYBPC2Q14324 1141 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 MTF1Q14872 753 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 CCL15Q16663 113 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 SRGAP1Q7Z6B7 1085 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 ANKRD23Q86SG2 305 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 GPRC5AQ8NFJ5 357 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 KIFAP3Q92845 792 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 AGPAT5Q9NUQ2 364 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 MAFBQ9Y5Q3 323 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 LRRC37A2A6NM11 1700 aa20.27■□□□□ 0.84
TSPAN4-212ENST00000494815 MAP2K7O14733 419 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 DGAT1O75907 488 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 ZBTB48P10074 688 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 CHMP4BP1P59074 171 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 MCPH1Q8NEM0 835 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 TMEM174Q8WUU8 243 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 EXOC4Q96A65 974 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 SH2D3AQ9BRG2 576 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 MMRN2Q9H8L6 949 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 AGPAT3Q9NRZ7 376 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 ZNHIT6Q9NWK9 470 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 TELO2Q9Y4R8 837 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 ADGRG1Q9Y653 693 aa20.27■□□□□ 0.83
TSPAN4-212ENST00000494815 DOCK5Q9H7D0 1870 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 IGKV6D-21A0A0A0MT36 114 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 BTBD19C9JJ37 291 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 CLIC2O15247 247 aa20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 CELF2O95319 508 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-212ENST00000494815 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms