RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 FAM102BQ5T8I3 360 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 DCAF15Q66K64 600 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 IQCEQ6IPM2 695 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 SWSAP1Q6NVH7 229 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
SAMM50-206ENST00000494795 GSPT2Q8IYD1 628 aaKnown RBP11.38□□□□□ -0.59
SAMM50-206ENST00000494795 KAT5Q92993 513 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 MS4A14Q96JA4 679 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 GDAP1L1Q96MZ0 367 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 GABBR1Q9UBS5 961 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 RNASE9P60153 205 aaKnown RBP11.38□□□□□ -0.59
SAMM50-206ENST00000494795 KIF5AQ12840 1032 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 SPA17Q15506 151 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 XKR9Q5GH70 373 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 FRMD5Q7Z6J6 570 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 PALB2Q86YC2 1186 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 GPC2Q8N158 579 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 OLIG1Q8TAK6 271 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 SAAL1Q96ER3 474 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
SAMM50-206ENST00000494795 EHMT1Q9H9B1 1298 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 ELP3Q9H9T3 547 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 RNF181Q9P0P0 153 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
SAMM50-206ENST00000494795 ADAMTS5Q9UNA0 930 aa11.38□□□□□ -0.59
SAMM50-206ENST00000494795 KRT86O43790 486 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 FTCDO95954 541 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 KCNA2P16389 499 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 USP14P54578 494 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 CDK17Q00537 523 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GHRHRQ02643 423 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 PPP3CAQ08209 521 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 C2orf54Q08AI8 447 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 SECISBP2LQ93073 1101 aaKnown RBP11.37□□□□□ -0.59
SAMM50-206ENST00000494795 OTUD5Q96G74 571 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 MAP7D2Q96T17 732 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 LCTP09848 1927 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GFPT2O94808 682 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 STBD1O95210 358 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 EPB41P11171 864 aaKnown RBP11.37□□□□□ -0.59
SAMM50-206ENST00000494795 LMNB1P20700 586 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GUCY2CP25092 1073 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 ADSSP30520 456 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 VSNL1P62760 191 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 KLHL30Q0D2K2 578 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 C1orf220Q5T0J3 134 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
SAMM50-206ENST00000494795 HDAC7Q8WUI4 952 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 ZBTB10Q96DT7 871 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GBP3Q9H0R5 595 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 TOPORSQ9NS56 1045 aaPredicted RBP11.37□□□□□ -0.59
SAMM50-206ENST00000494795 ZRANB2O95218 330 aaKnown RBP eCLIP11.37□□□□□ -0.59
SAMM50-206ENST00000494795 LCA5LO95447 670 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GNA14O95837 355 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 TRAF1Q13077 416 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 SEPT14Q6ZU15 432 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 CYFIP1Q7L576 1253 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GOLGA1Q92805 767 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 GPR88Q9GZN0 384 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 PAPPA2Q9BXP8 1791 aa11.37□□□□□ -0.59
SAMM50-206ENST00000494795 EXOC3O60645 756 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 ADRB2P07550 413 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 GAP43P17677 238 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 ATP4AP20648 1035 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
SAMM50-206ENST00000494795 GCLMP48507 274 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 ARHGAP44Q17R89 818 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 CC2D1AQ6P1N0 951 aaPredicted RBP11.36□□□□□ -0.59
SAMM50-206ENST00000494795 FOXR2Q6PJQ5 311 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 HAUS6Q7Z4H7 955 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 APOBEC3FQ8IUX4 373 aaKnown RBP11.36□□□□□ -0.59
SAMM50-206ENST00000494795 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 TXNRD2Q9NNW7 524 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 ZCCHC17Q9NP64 241 aaKnown RBP11.36□□□□□ -0.59
SAMM50-206ENST00000494795 SAR1BQ9Y6B6 198 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 CCDC169A6NNP5 214 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 TBC1D8O95759 1140 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 PGK2P07205 417 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 FMO5P49326 533 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
SAMM50-206ENST00000494795 CBWD2Q8IUF1 395 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 SPAG5Q96R06 1193 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 HYOU1Q9Y4L1 999 aa11.36□□□□□ -0.59
SAMM50-206ENST00000494795 EIF3DO15371 548 aaKnown RBP eCLIP11.35□□□□□ -0.59
SAMM50-206ENST00000494795 SLC26A4O43511 780 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 KIF20AO95235 890 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 IPO7O95373 1038 aaKnown RBP11.35□□□□□ -0.59
SAMM50-206ENST00000494795 SERPING1P05155 500 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 MYBL2P10244 700 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 PSMC2P35998 433 aaKnown RBP11.35□□□□□ -0.59
SAMM50-206ENST00000494795 WNT7BP56706 349 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 Q3C1V9 767 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 SLC9C1Q4G0N8 1177 aa11.35□□□□□ -0.59
SAMM50-206ENST00000494795 PAPD7Q5XG87 772 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms