RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 PLA2G4FQ68DD2 849 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 MOXD1Q6UVY6 613 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 SLC24A5Q71RS6 500 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-208ENST00000494728 CWH43Q9H720 699 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 KCNMB3Q9NPA1 279 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 PPP4R2Q9NY27 417 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
VTI1A-208ENST00000494728 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
VTI1A-208ENST00000494728 WNT7AO00755 349 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 GPR182O15218 404 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 MAGEB2O15479 319 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 SEC24BO95487 1268 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 GLP2RO95838 553 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-208ENST00000494728 PBX3P40426 434 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 FAM189BP81408 668 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 NR5A1Q13285 461 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 ME3Q16798 604 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 ANO5Q75V66 913 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 KRT25Q7Z3Z0 450 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
VTI1A-208ENST00000494728 HAS1Q92839 578 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 MAP7D2Q96T17 732 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
VTI1A-208ENST00000494728 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 PCDHB7Q9Y5E2 793 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 TECTAO75443 2155 aa13.11□□□□□ -0.31
VTI1A-208ENST00000494728 IGKV6-21A0A0C4DH24 114 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 DARSP14868 501 aaKnown RBP13.1□□□□□ -0.31
VTI1A-208ENST00000494728 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
VTI1A-208ENST00000494728 ANAPC15P60006 121 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 ZP2Q05996 745 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 SPIRE1Q08AE8 756 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 TBC1D8BQ0IIM8 1120 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 GALNT17Q6IS24 598 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 CPLX2Q6PUV4 134 aaKnown RBP13.1□□□□□ -0.31
VTI1A-208ENST00000494728 PIK3AP1Q6ZUJ8 805 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 COLGALT1Q8NBJ5 622 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 NIFKQ9BYG3 293 aaKnown RBP13.1□□□□□ -0.31
VTI1A-208ENST00000494728 C22orf23Q9BZE7 217 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 CLEC1BQ9P126 229 aa13.1□□□□□ -0.31
VTI1A-208ENST00000494728 ZDBF2Q9HCK1 2354 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 MBTPS2O43462 519 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 JAK2O60674 1132 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 FGF18O76093 207 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 FOSBP53539 338 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 NPEPPSP55786 919 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 ERVFC1P60507 584 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 PPP2R5CQ13362 524 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
VTI1A-208ENST00000494728 ECHDC2Q86YB7 292 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-208ENST00000494728 GJD3Q8N144 294 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 CASD1Q96PB1 797 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
VTI1A-208ENST00000494728 BMP2KQ9NSY1 1161 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-208ENST00000494728 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-208ENST00000494728 BARX2Q9UMQ3 279 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-208ENST00000494728 TDRD15B5MCY1 1934 aaKnown RBP13.09□□□□□ -0.31
VTI1A-208ENST00000494728 MYO15AQ9UKN7 3530 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 A0A087WZ62 844 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.32
VTI1A-208ENST00000494728 MAFO75444 373 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-208ENST00000494728 CDKL5O76039 1030 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 TMOD1P28289 359 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 NRIP1P48552 1158 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 ADAM15Q13444 863 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 PPP4R3AQ6IN85 833 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
VTI1A-208ENST00000494728 RNF169Q8NCN4 708 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
VTI1A-208ENST00000494728 NLRP7Q8WX94 980 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 FDXACB1Q9BRP7 624 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-208ENST00000494728 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
VTI1A-208ENST00000494728 DMDP11532 3685 aa13.08□□□□□ -0.32
VTI1A-208ENST00000494728 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
VTI1A-208ENST00000494728 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms