RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ICAM1P05362 532 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 ASNSP08243 561 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 ALAS1P13196 640 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 MUTP22033 750 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 SOX5P35711 763 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 ARHGAP44Q17R89 818 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 B3GNT9Q6UX72 402 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 GLYCTKQ8IVS8 523 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 DAW1Q8N136 415 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 PSMD1Q99460 953 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 RIT2Q99578 217 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 STK33Q9BYT3 514 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 DMAC2Q9NW81 257 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 ZNF536O15090 1300 aa12.21□□□□□ -0.46
CHMP3-209ENST00000494623 K7ENM7 598 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 DPEP1P16444 411 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 GUCY2CP25092 1073 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 TRADDQ15628 312 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 NFIL3Q16649 462 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 EMBQ6PCB8 327 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-209ENST00000494623 LNX1Q8TBB1 728 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-209ENST00000494623 RAVER2Q9HCJ3 691 aaKnown RBP12.2□□□□□ -0.46
CHMP3-209ENST00000494623 KCND2Q9NZV8 630 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 ZNRF3Q9ULT6 936 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 ATAD5Q96QE3 1844 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 TISP43B9A030 160 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 F8VZ95 297 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 WNT10BO00744 389 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 FAM153BP0C7A2 387 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 HSD17B4P51659 736 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 GALCP54803 685 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 MAPK7Q13164 816 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 TNIP1Q15025 636 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 FAM153CQ494X1 144 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 PEX26Q7Z412 305 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 DAAM2Q86T65 1068 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 FAM83AQ86UY5 434 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 CLEC4DQ8WXI8 215 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 AP1M1Q9BXS5 423 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 INTS2Q9H0H0 1204 aaKnown RBP12.2□□□□□ -0.46
CHMP3-209ENST00000494623 GDF3Q9NR23 364 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 SEPT11Q9NVA2 429 aaKnown RBP12.2□□□□□ -0.46
CHMP3-209ENST00000494623 FAM153AQ9UHL3 310 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 ZHX2Q9Y6X8 837 aa12.2□□□□□ -0.46
CHMP3-209ENST00000494623 P4HBP07237 508 aaKnown RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 GUCY2FP51841 1108 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 KCTD19Q17RG1 926 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 FKBP1CQ5VVH2 108 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 PRPF38AQ8NAV1 312 aaKnown RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 PBKQ96KB5 322 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 NENFQ9UMX5 172 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 TMEM150BA6NC51 233 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 GOLGA6CA6NDK9 693 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 DHX15O43143 795 aaKnown RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 RAD51CO43502 376 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 HSF2BPO75031 334 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 GOLGA6DP0CG33 693 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 ABCB4P21439 1286 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 TNNC1P63316 161 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 DLG4P78352 724 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 MYL7Q01449 175 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 CXCL9Q07325 125 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 BFSP1Q12934 665 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 ITGB3BPQ13352 177 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-209ENST00000494623 RASA3Q14644 834 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 METTL13Q8N6R0 699 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 CASKIN2Q8WXE0 1202 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 CAVIN3Q969G5 261 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 GOLGA6AQ9NYA3 693 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 UBE4BO95155 1302 aa12.19□□□□□ -0.46
CHMP3-209ENST00000494623 COL4A5P29400 1685 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 LRRN2O75325 713 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 MYCLP12524 364 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-209ENST00000494623 TNFAIP3P21580 790 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 KCNA3P22001 575 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 KCNA4P22459 653 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 ANXA13P27216 316 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 TNFRSF8P28908 595 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 MRPS9P82933 396 aaKnown RBP12.18□□□□□ -0.46
CHMP3-209ENST00000494623 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-209ENST00000494623 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 PHLDB3Q6NSJ2 640 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 SLC30A5Q8TAD4 765 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 FAM76AQ8TAV0 307 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 GPR88Q9GZN0 384 aa12.18□□□□□ -0.46
CHMP3-209ENST00000494623 AGO4Q9HCK5 861 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms