RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 WDR66Q8TBY9 1149 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 TTC1Q99614 292 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 CSRNP2Q9H175 543 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 TMX1Q9H3N1 280 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 RIC8BQ9NVN3 520 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 MCM8Q9UJA3 840 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 SRPK3Q9UPE1 567 aa6.13□□□□□ -1.43
SMC4-224ENST00000494612 CUTAO60888 179 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 RAD17O75943 681 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 EYA4O95677 639 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 ZBTB48P10074 688 aaPredicted RBP6.12□□□□□ -1.43
SMC4-224ENST00000494612 COMTP21964 271 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 MCM7P33993 719 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 KPNA1P52294 538 aaPredicted RBP6.12□□□□□ -1.43
SMC4-224ENST00000494612 NANOS3P60323 173 aaKnown RBP6.12□□□□□ -1.43
SMC4-224ENST00000494612 DPTQ07507 201 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 DHCR24Q15392 516 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 SEC23AQ15436 765 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 NRN1LQ496H8 165 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 BTBD8Q5XKL5 378 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 SMC1BQ8NDV3 1235 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 COG1Q8WTW3 980 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 BOCQ9BWV1 1114 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 BRINP2Q9C0B6 783 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 IKZF4Q9H2S9 585 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 IFT22Q9H7X7 185 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 SLC39A2Q9NP94 309 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 OXSMQ9NWU1 459 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 ATP23Q9Y6H3 246 aa6.12□□□□□ -1.43
SMC4-224ENST00000494612 FAM90A27PA6NNH2 459 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 DVL2O14641 736 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 HSP90B1P14625 803 aaKnown RBP6.11□□□□□ -1.43
SMC4-224ENST00000494612 CPEP16870 476 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 KIF11P52732 1056 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 RAC3P60763 192 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 ARHGAP44Q17R89 818 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 RNF151Q2KHN1 245 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 KIF18BQ86Y91 864 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 AMER2Q8N7J2 671 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 EXTL1Q92935 676 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
SMC4-224ENST00000494612 PRAMEF25A6NGN4 478 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 H7C1D1 291 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 MATN2O00339 956 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 HIP1RO75146 1068 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 KATNA1O75449 491 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 BPIP17213 487 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 CR2P20023 1033 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 GUCY2FP51841 1108 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 DUSP8Q13202 625 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 ZNF174Q15697 407 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 ATP13A4Q4VNC1 1196 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 USP39Q53GS9 565 aaKnown RBP6.1□□□□□ -1.43
SMC4-224ENST00000494612 HDGFL2Q7Z4V5 671 aaPredicted RBP6.1□□□□□ -1.43
SMC4-224ENST00000494612 NOSTRINQ8IVI9 506 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 DNAJC10Q8IXB1 793 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 NLGN4XQ8N0W4 816 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 ERCC4Q92889 916 aaPredicted RBP6.1□□□□□ -1.43
SMC4-224ENST00000494612 ELF4Q99607 663 aaPredicted RBP6.1□□□□□ -1.43
SMC4-224ENST00000494612 ORAI3Q9BRQ5 295 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 MS4A5Q9H3V2 200 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 TOMM22Q9NS69 142 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 HOMER2Q9NSB8 354 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
SMC4-224ENST00000494612 OAZ3Q9UMX2 235 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 SLC30A1Q9Y6M5 507 aa6.1□□□□□ -1.43
SMC4-224ENST00000494612 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.09□□□□□ -1.43
SMC4-224ENST00000494612 LCHNA4D1U4 455 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 NARSO43776 548 aaKnown RBP6.09□□□□□ -1.43
SMC4-224ENST00000494612 RAB11FIP3O75154 756 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 PTPN1P18031 435 aaKnown RBP6.09□□□□□ -1.43
SMC4-224ENST00000494612 PTX3P26022 381 aaPredicted RBP6.09□□□□□ -1.43
SMC4-224ENST00000494612 NOLC1Q14978 699 aaKnown RBP eCLIP6.09□□□□□ -1.43
SMC4-224ENST00000494612 CREB3L3Q68CJ9 461 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 MAMDC4Q6UXC1 1216 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 DPP8Q6V1X1 898 aaPredicted RBP6.09□□□□□ -1.43
SMC4-224ENST00000494612 OTOP1Q7RTM1 612 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 C11orf74Q86VG3 221 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 STAG1Q8WVM7 1258 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 CCDC8Q9H0W5 538 aaPredicted RBP6.09□□□□□ -1.43
SMC4-224ENST00000494612 PCIF1Q9H4Z3 704 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 VTA1Q9NP79 307 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 EMC7Q9NPA0 242 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 SLC5A4Q9NY91 659 aa6.09□□□□□ -1.43
SMC4-224ENST00000494612 GPR39O43194 453 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 TGM5O43548 720 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 BRINP1O60477 761 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 CLASP2O75122 1294 aaKnown RBP6.08□□□□□ -1.44
SMC4-224ENST00000494612 ACO1P21399 889 aaKnown RBP6.08□□□□□ -1.44
SMC4-224ENST00000494612 ETV4P43268 484 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 LSSP48449 732 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 ITKQ08881 620 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 NFYCQ13952 458 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 FIGNQ5HY92 759 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 IQSEC1Q6DN90 963 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 DPYSL5Q9BPU6 564 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 ZDHHC5Q9C0B5 715 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 TNFRSF18Q9Y5U5 241 aa6.08□□□□□ -1.44
SMC4-224ENST00000494612 WASHC2CQ9Y4E1 1318 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms