RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DAAM1Q9Y4D1 1078 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 PFASO15067 1338 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 DDX3YO15523 660 aaKnown RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 GSTT1P30711 240 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 FOXN2P32314 431 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 SERPINB4P48594 390 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 CACNA2D1P54289 1103 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 SLC35G1Q2M3R5 365 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 KHDC1Q4VXA5 237 aaKnown RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 RNF43Q68DV7 783 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 PLPPR3Q6T4P5 718 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 RBBP8NLQ8NC74 664 aaPredicted RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 SH3RF3Q8TEJ3 882 aaPredicted RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 C18orf8Q96DM3 657 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 ERP27Q96DN0 273 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 TRAPPC9Q96Q05 1148 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 DDX50Q9BQ39 737 aaKnown RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 TMEM109Q9BVC6 243 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 TRIM7Q9C029 511 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 ZWILCHQ9H900 591 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 OSGEPQ9NPF4 335 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 METTL5Q9NRN9 209 aaKnown RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 AJAP1Q9UKB5 411 aaPredicted RBP10.95□□□□□ -0.66
LINC00488-201ENST00000494582 BLOC1S6Q9UL45 172 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
LINC00488-201ENST00000494582 DUOX1Q9NRD9 1551 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 NVLO15381 856 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ATP9AO75110 1047 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 PTGIRP43119 386 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 MAGEA10P43363 369 aaPredicted RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 INHBCP55103 352 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ADCY1Q08828 1119 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 PRPF4BQ13523 1007 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ALKBH5Q6P6C2 394 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ZDHHC14Q8IZN3 488 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 GUF1Q8N442 669 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 RAPGEF4Q8WZA2 1011 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ARHGEF2Q92974 986 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 TGS1Q96RS0 853 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 CNOT7Q9UIV1 285 aaKnown RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 PCDHA4Q9UN74 947 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 CBX6O95503 412 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 KCNA3P22001 575 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 TPP2P29144 1249 aaPredicted RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 TECP42680 631 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 MAGEA8P43361 318 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 GRB10Q13322 594 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 TSNAXIP1Q2TAA8 658 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ZCWPW2Q504Y3 356 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 KBTBD2Q8IY47 623 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 MMADHCQ9H3L0 296 aaPredicted RBP10.94□□□□□ -0.66
LINC00488-201ENST00000494582 CUEDC2Q9H467 287 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 ZNF232Q9UNY5 417 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 PCDHA3Q9Y5H8 950 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 COL4A3BPQ9Y5P4 624 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 NUMBLQ9Y6R0 609 aa10.94□□□□□ -0.66
LINC00488-201ENST00000494582 MYH3P11055 1940 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 BAZ2AQ9UIF9 1905 aaKnown RBP10.93□□□□□ -0.66
LINC00488-201ENST00000494582 IGSF9BQ9UPX0 1349 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 CCDC194A0A1B0GVG4 234 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 PDLIM1O00151 329 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 PSMC4P43686 418 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 CNPY1Q3B7I2 92 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 MFSD5Q6N075 450 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 TTC27Q6P3X3 843 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 ZNF449Q6P9G9 518 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 CYP4X1Q8N118 509 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 OLIG1Q8TAK6 271 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 GATA6Q92908 595 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 KCNK9Q9NPC2 374 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 NLRP2Q9NX02 1062 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 KLHL14Q9P2G3 628 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
LINC00488-201ENST00000494582 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 USP20Q9Y2K6 914 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
LINC00488-201ENST00000494582 CREB3O43889 395 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 DDAH1O94760 285 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 TJP3O95049 919 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 PLCG2P16885 1265 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 SLC9A1P19634 815 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 TAC1P20366 129 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 FGFR2P21802 821 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 PPP1R2P41236 205 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 CABP4P57796 275 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 LRRC63Q05C16 580 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 MCL1Q07820 350 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 CCDC15Q0P6D6 951 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 DYNC1I2Q13409 638 aaKnown RBP10.93□□□□□ -0.66
LINC00488-201ENST00000494582 MTFR1Q15390 333 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 LMOD2Q6P5Q4 547 aa10.93□□□□□ -0.66
LINC00488-201ENST00000494582 BTNL9Q6UXG8 535 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms