RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SUCLA2Q9P2R7 463 aaPredicted RBP37.19■■■■□ 3.54
CBX4-203ENST00000494546 RWDD3Q9Y3V2 267 aa37.19■■■■□ 3.54
CBX4-203ENST00000494546 DARSP14868 501 aaKnown RBP37.18■■■■□ 3.54
CBX4-203ENST00000494546 YWHABP31946 246 aaKnown RBP37.18■■■■□ 3.54
CBX4-203ENST00000494546 GATMP50440 423 aa37.18■■■■□ 3.54
CBX4-203ENST00000494546 TJAP1Q5JTD0 557 aa37.18■■■■□ 3.54
CBX4-203ENST00000494546 TPH2Q8IWU9 490 aa37.18■■■■□ 3.54
CBX4-203ENST00000494546 CMTR2Q8IYT2 770 aaKnown RBP37.18■■■■□ 3.54
CBX4-203ENST00000494546 ZNF579Q8NAF0 562 aaKnown RBP37.18■■■■□ 3.54
CBX4-203ENST00000494546 JPH2Q9BR39 696 aaPredicted RBP37.18■■■■□ 3.54
CBX4-203ENST00000494546 C9IYK1 514 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 LINC00271P0C7V0 271 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 BMPR1AP36894 532 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 CDC42EP1Q00587 391 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 PTPROQ16827 1216 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 RHPN2Q8IUC4 686 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 CLP1Q92989 425 aaKnown RBP37.17■■■■□ 3.54
CBX4-203ENST00000494546 MTMR9Q96QG7 549 aa37.17■■■■□ 3.54
CBX4-203ENST00000494546 EIF2AK1Q9BQI3 630 aaKnown RBP37.17■■■■□ 3.54
CBX4-203ENST00000494546 MRPL42Q9Y6G3 142 aaKnown RBP37.17■■■■□ 3.54
CBX4-203ENST00000494546 NLRC5Q86WI3 1866 aa37.16■■■■□ 3.54
CBX4-203ENST00000494546 FGFR4P22455 802 aa37.16■■■■□ 3.54
CBX4-203ENST00000494546 MRPS5P82675 430 aaKnown RBP37.16■■■■□ 3.54
CBX4-203ENST00000494546 DSC3Q14574 896 aa37.16■■■■□ 3.54
CBX4-203ENST00000494546 OTUD6AQ7L8S5 288 aa37.16■■■■□ 3.54
CBX4-203ENST00000494546 SLC7A3Q8WY07 619 aa37.16■■■■□ 3.54
CBX4-203ENST00000494546 GCOM2Q9BZD3 368 aaPredicted RBP37.16■■■■□ 3.54
CBX4-203ENST00000494546 TMEM60Q9H2L4 133 aa37.16■■■■□ 3.54
CBX4-203ENST00000494546 RNF216Q9NWF9 866 aaPredicted RBP37.16■■■■□ 3.54
CBX4-203ENST00000494546 CSDE1O75534 798 aaKnown RBP37.15■■■■□ 3.54
CBX4-203ENST00000494546 ZSCAN20P17040 1043 aaPredicted RBP37.15■■■■□ 3.54
CBX4-203ENST00000494546 POLGP54098 1239 aaPredicted RBP37.15■■■■□ 3.54
CBX4-203ENST00000494546 MRPL38Q96DV4 380 aaKnown RBP37.15■■■■□ 3.54
CBX4-203ENST00000494546 ASB2Q96Q27 587 aa37.15■■■■□ 3.54
CBX4-203ENST00000494546 A0A087WZ62 844 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 C5orf67F2Z3F1 127 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 ZBTB39O15060 712 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 SLITRK3O94933 977 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 RB1P06400 928 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 TFF2Q03403 129 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 XKR9Q5GH70 373 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 FDXACB1Q9BRP7 624 aaPredicted RBP37.14■■■■□ 3.54
CBX4-203ENST00000494546 C11orf84Q9BUA3 381 aaPredicted RBP37.14■■■■□ 3.54
CBX4-203ENST00000494546 BMP2KQ9NSY1 1161 aaPredicted RBP37.14■■■■□ 3.54
CBX4-203ENST00000494546 PPME1Q9Y570 386 aa37.14■■■■□ 3.54
CBX4-203ENST00000494546 RALGAPA2Q2PPJ7 1873 aa37.13■■■■□ 3.54
CBX4-203ENST00000494546 ZNF174Q15697 407 aa37.13■■■■□ 3.53
CBX4-203ENST00000494546 NOSTRINQ8IVI9 506 aa37.13■■■■□ 3.53
CBX4-203ENST00000494546 KSR1Q8IVT5 923 aa37.13■■■■□ 3.53
CBX4-203ENST00000494546 EXOC8Q8IYI6 725 aa37.13■■■■□ 3.53
CBX4-203ENST00000494546 SYMPKQ92797 1274 aaKnown RBP37.13■■■■□ 3.53
CBX4-203ENST00000494546 NLRP4Q96MN2 994 aa37.13■■■■□ 3.53
CBX4-203ENST00000494546 RFC5P40937 340 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 FAM102BQ5T8I3 360 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 ZNF410Q86VK4 478 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 TMX3Q96JJ7 454 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 TBC1D32Q96NH3 1257 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 HSD17B14Q9BPX1 270 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 DHX33Q9H6R0 707 aaKnown RBP37.12■■■■□ 3.53
CBX4-203ENST00000494546 ATP6V0A4Q9HBG4 840 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 TMEM161AQ9NX61 479 aa37.12■■■■□ 3.53
CBX4-203ENST00000494546 TBKBP1A7MCY6 615 aa37.11■■■■□ 3.53
CBX4-203ENST00000494546 CD2BP2O95400 341 aaKnown RBP37.11■■■■□ 3.53
CBX4-203ENST00000494546 FAM189BP81408 668 aa37.11■■■■□ 3.53
CBX4-203ENST00000494546 IL27Q8NEV9 243 aa37.11■■■■□ 3.53
CBX4-203ENST00000494546 NEK9Q8TD19 979 aa37.11■■■■□ 3.53
CBX4-203ENST00000494546 TMEM143Q96AN5 459 aa37.11■■■■□ 3.53
CBX4-203ENST00000494546 COG5Q9UP83 839 aa37.11■■■■□ 3.53
CBX4-203ENST00000494546 POTEMA6NI47 508 aa37.1■■■■□ 3.53
CBX4-203ENST00000494546 TTC38Q5R3I4 469 aa37.1■■■■□ 3.53
CBX4-203ENST00000494546 HLA-CQ95604 372 aa37.1■■■■□ 3.53
CBX4-203ENST00000494546 PLVAPQ9BX97 442 aa37.1■■■■□ 3.53
CBX4-203ENST00000494546 ELAC1Q9H777 363 aaKnown RBP37.1■■■■□ 3.53
CBX4-203ENST00000494546 COL4A3BPQ9Y5P4 624 aa37.1■■■■□ 3.53
CBX4-203ENST00000494546 REV3LO60673 3130 aa37.1■■■■□ 3.53
CBX4-203ENST00000494546 FGFR1P11362 822 aa37.09■■■■□ 3.53
CBX4-203ENST00000494546 EMC2Q15006 297 aa37.09■■■■□ 3.53
CBX4-203ENST00000494546 NOL7Q9UMY1 257 aaKnown RBP37.09■■■■□ 3.53
CBX4-203ENST00000494546 KIF3AQ9Y496 699 aa37.09■■■■□ 3.53
CBX4-203ENST00000494546 GRM6O15303 877 aa37.08■■■■□ 3.53
CBX4-203ENST00000494546 SFPQP23246 707 aaKnown RBP eCLIP37.08■■■■□ 3.53
CBX4-203ENST00000494546 AAK1Q2M2I8 961 aa37.08■■■■□ 3.53
CBX4-203ENST00000494546 TIGD5Q53EQ6 642 aa37.08■■■■□ 3.53
CBX4-203ENST00000494546 PSPC1Q8WXF1 523 aaKnown RBP37.08■■■■□ 3.53
CBX4-203ENST00000494546 INO80BQ9C086 356 aaPredicted RBP37.08■■■■□ 3.53
CBX4-203ENST00000494546 LYPLA2O95372 231 aa37.07■■■■□ 3.52
CBX4-203ENST00000494546 OR52Z1P0C646 297 aa37.07■■■■□ 3.52
CBX4-203ENST00000494546 ORC2Q13416 577 aaPredicted RBP37.07■■■■□ 3.52
CBX4-203ENST00000494546 PRPF31Q8WWY3 499 aaKnown RBP37.07■■■■□ 3.52
CBX4-203ENST00000494546 TECP42680 631 aa37.06■■■■□ 3.52
CBX4-203ENST00000494546 SPOUT1Q5T280 376 aaKnown RBP37.06■■■■□ 3.52
CBX4-203ENST00000494546 ECHDC2Q86YB7 292 aa37.06■■■■□ 3.52
CBX4-203ENST00000494546 RNF169Q8NCN4 708 aa37.06■■■■□ 3.52
CBX4-203ENST00000494546 TCP11Q8WWU5 503 aa37.06■■■■□ 3.52
CBX4-203ENST00000494546 CCDC43Q96MW1 224 aaKnown RBP37.06■■■■□ 3.52
CBX4-203ENST00000494546 MTRQ99707 1265 aa37.06■■■■□ 3.52
CBX4-203ENST00000494546 ALG13Q9NP73 1137 aaKnown RBP37.06■■■■□ 3.52
CBX4-203ENST00000494546 GAS2O43903 313 aaKnown RBP37.05■■■■□ 3.52
CBX4-203ENST00000494546 CSPG5O95196 566 aa37.05■■■■□ 3.52
CBX4-203ENST00000494546 SRGAP2CP0DJJ0 459 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms