RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TMEM119Q4V9L6 283 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 TSHZ1Q6ZSZ6 1077 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 OTOP2Q7RTS6 562 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 APBB2Q92870 758 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 EPSTI1Q96J88 318 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 SPATA32Q96LK8 384 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 PNMA5Q96PV4 448 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 IFIH1Q9BYX4 1025 aaKnown RBP13.87□□□□□ -0.19
TRA2A-209ENST00000494255 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
TRA2A-209ENST00000494255 COL4A3BPQ9Y5P4 624 aa13.87□□□□□ -0.19
TRA2A-209ENST00000494255 ZBBXA8MT70 800 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 ASAP2O43150 1006 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRA2A-209ENST00000494255 PLCG1P19174 1290 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 GPC3P51654 580 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 IKBKEQ14164 716 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 MXD4Q14582 209 aaPredicted RBP13.86□□□□□ -0.19
TRA2A-209ENST00000494255 LPIN1Q14693 890 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 KARSQ15046 597 aaKnown RBP13.86□□□□□ -0.19
TRA2A-209ENST00000494255 PLEKHG4Q58EX7 1191 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 DBF4BQ8NFT6 615 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 PRPF31Q8WWY3 499 aaKnown RBP13.86□□□□□ -0.19
TRA2A-209ENST00000494255 VWCEQ96DN2 955 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 OSMRQ99650 979 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
TRA2A-209ENST00000494255 ADAMTS10Q9H324 1103 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 CDHR5Q9HBB8 845 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 XPNPEP1Q9NQW7 623 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 RCOR1Q9UKL0 485 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 TET1Q8NFU7 2136 aa13.86□□□□□ -0.19
TRA2A-209ENST00000494255 ABHD14A-ACY1A0A1B0GW23 586 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 EFCAB14O75071 495 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 RPS6KA5O75582 802 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 CYP11B2P19099 503 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 KCNJ6P48051 423 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 LAMTOR4Q0VGL1 99 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 PAK2Q13177 524 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 TFDP1Q14186 410 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 USP49Q70CQ1 688 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 ZNF668Q96K58 619 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-209ENST00000494255 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-209ENST00000494255 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-209ENST00000494255 GPR182O15218 404 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 PLA2G4BP0C869 781 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 CD52P31358 61 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 RRAGBQ5VZM2 374 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 LEO1Q8WVC0 666 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-209ENST00000494255 OSBPL7Q9BZF2 842 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 INO80BQ9C086 356 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-209ENST00000494255 CHMP5Q9NZZ3 219 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 STK17AQ9UEE5 414 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
TRA2A-209ENST00000494255 TCHHQ07283 1943 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 A0A087WZ62 844 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 SRGAP2CP0DJJ0 459 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 EIF4BP23588 611 aaKnown RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 CCDC73Q6ZRK6 1079 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 KSR1Q8IVT5 923 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 SYT2Q8N9I0 419 aaPredicted RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 RNF149Q8NC42 400 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 PADI3Q9ULW8 664 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 PCDHA7Q9UN72 937 aa13.84□□□□□ -0.19
TRA2A-209ENST00000494255 NOC2LQ9Y3T9 749 aaKnown RBP13.84□□□□□ -0.19
TRA2A-209ENST00000494255 ARL2P36404 184 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 STAT6P42226 847 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 PHKA2P46019 1235 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 AXDND1Q5T1B0 1012 aaPredicted RBP13.83□□□□□ -0.2
TRA2A-209ENST00000494255 RASIP1Q5U651 963 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 RINT1Q6NUQ1 792 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 FAM43BQ6ZT52 329 aaPredicted RBP13.83□□□□□ -0.2
TRA2A-209ENST00000494255 ASAP3Q8TDY4 903 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 TMEM40Q8WWA1 233 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
TRA2A-209ENST00000494255 RAD54LQ92698 747 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 KIFAP3Q92845 792 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 CHAMP1Q96JM3 812 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 RUSC1Q9BVN2 902 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 TIPINQ9BVW5 301 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 GPRC5CQ9NQ84 441 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 FAM13BQ9NYF5 915 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
TRA2A-209ENST00000494255 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
TRA2A-209ENST00000494255 SFPQP23246 707 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRA2A-209ENST00000494255 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
TRA2A-209ENST00000494255 DHX8Q14562 1220 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms