RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 DHX58Q96C10 678 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 RRP36Q96EU6 259 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 NAP1L5Q96NT1 182 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 IDI2Q9BXS1 227 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 NRSN2Q9GZP1 204 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 TMEM60Q9H2L4 133 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 PRDM16Q9HAZ2 1276 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 FANCLQ9NW38 375 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 IMPACTQ9P2X3 320 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 SERPINB13Q9UIV8 391 aa6.78□□□□□ -1.32
CPSF7-213ENST00000494016 HOOK1Q9UJC3 728 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 R3HCC1Q9Y3T6 440 aaKnown RBP6.78□□□□□ -1.32
CPSF7-213ENST00000494016 YDJCA8MPS7 323 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 MYO1BO43795 1136 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 MARCH6O60337 910 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 SMC2O95347 1197 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 HSPA1AP0DMV8 641 aaKnown RBP6.77□□□□□ -1.33
CPSF7-213ENST00000494016 HSPA1BP0DMV9 641 aaKnown RBP6.77□□□□□ -1.33
CPSF7-213ENST00000494016 ZNF18P17022 549 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 NOS3P29474 1203 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CDC25AP30304 524 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 LONP1P36776 959 aaKnown RBP6.77□□□□□ -1.33
CPSF7-213ENST00000494016 AFMP43652 599 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CCZ1BP86790 482 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CCZ1P86791 482 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-213ENST00000494016 MYL5Q02045 173 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 GSTM4Q03013 218 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 ZNF543Q08ER8 600 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CUL4BQ13620 913 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 DUOXA2Q1HG44 320 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 INF2Q27J81 1249 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 DALRD3Q5D0E6 543 aaKnown RBP6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-213ENST00000494016 TTBK2Q6IQ55 1244 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 ARMCX5Q6P1M9 558 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 TATDN1Q6P1N9 297 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CLEC10AQ8IUN9 316 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 KIAA0825Q8IV33 1275 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CCDC148Q8NFR7 591 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 COA7Q96BR5 231 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 MTMR8Q96EF0 704 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 CCDC17Q96LX7 622 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 DNAJC18Q9H819 358 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 JMJD4Q9H9V9 463 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 C6orf50Q9HD87 102 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 RNF19AQ9NV58 838 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 PIM2Q9P1W9 311 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 FAM8A1Q9UBU6 413 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 MYH4Q9Y623 1939 aa6.77□□□□□ -1.33
CPSF7-213ENST00000494016 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 WDR90Q96KV7 1748 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 CCDC194A0A1B0GVG4 234 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 ESYT2A0FGR8 921 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 PP2D1A8MPX8 630 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 NEMFO60524 1076 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 PPP1R11O60927 126 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 TTLL1O95922 423 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 ERCC5P28715 1186 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 GNA11P29992 359 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 PRPHP41219 470 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 IREB2P48200 963 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 CACNB3P54284 484 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 NAPAP54920 295 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 EIF6P56537 245 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 UBASH3AP57075 661 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 TPM4P67936 248 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 JAG1P78504 1218 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 TAGLNQ01995 201 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 RRP1BQ14684 758 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 AOC3Q16853 763 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 SHROOM1Q2M3G4 852 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 ASPRV1Q53RT3 343 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 NAALADL2Q58DX5 795 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 C9orf131Q5VYM1 1079 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 Q6ZS46 218 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 APTXQ7Z2E3 356 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 HOMER1Q86YM7 354 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 EXOC8Q8IYI6 725 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 ADGRF4Q8IZF3 695 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 LRRC47Q8N1G4 583 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 IQUBQ8NA54 791 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 LRRC15Q8TF66 581 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 STAMQ92783 540 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 PRMT6Q96LA8 375 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 GSDMAQ96QA5 445 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 TRIM56Q9BRZ2 755 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 CCSER1Q9C0I3 900 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
CPSF7-213ENST00000494016 KCND1Q9NSA2 647 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 INTS13Q9NVM9 706 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 TMEM260Q9NX78 707 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 NYAP2Q9P242 653 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
CPSF7-213ENST00000494016 AK5Q9Y6K8 562 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms