RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 KCNQ5Q9NR82 932 aa15.28■□□□□ 0.04
ZIC4-215ENST00000493664 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
ZIC4-215ENST00000493664 UTP11Q9Y3A2 253 aaKnown RBP15.28■□□□□ 0.04
ZIC4-215ENST00000493664 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
ZIC4-215ENST00000493664 KIF13BQ9NQT8 1826 aa15.28■□□□□ 0.04
ZIC4-215ENST00000493664 BHMG1C9JSJ3 638 aaPredicted RBP15.27■□□□□ 0.04
ZIC4-215ENST00000493664 GDF11O95390 407 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 PPP2R2AP63151 447 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 CBWD6Q4V339 395 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 CBWD3Q5JTY5 395 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 CBWD5Q5RIA9 395 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 RUFY4Q6ZNE9 571 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 TPH2Q8IWU9 490 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 CCDC13Q8IYE1 715 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 FAM186BQ8IYM0 893 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.04
ZIC4-215ENST00000493664 RAPGEF5Q92565 580 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 METTL14Q9HCE5 456 aaKnown RBP15.27■□□□□ 0.04
ZIC4-215ENST00000493664 GOPCQ9HD26 462 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 DNAJC12Q9UKB3 198 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.27■□□□□ 0.04
ZIC4-215ENST00000493664 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.04
ZIC4-215ENST00000493664 PHF20L1A8MW92 1017 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 F8VZ95 297 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 LRRN2O75325 713 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 ZNF76P36508 570 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 CYP2J2P51589 502 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 RINT1Q6NUQ1 792 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 SPATS2Q86XZ4 545 aaKnown RBP15.27■□□□□ 0.04
ZIC4-215ENST00000493664 SIAH1Q8IUQ4 282 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 TMOD4Q9NZQ9 345 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
ZIC4-215ENST00000493664 ZMYM2Q9UBW7 1377 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 ATXN2Q99700 1313 aaKnown RBP15.27■□□□□ 0.03
ZIC4-215ENST00000493664 TRAPPC3O43617 180 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 SHBGP04278 402 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 FERP16591 822 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 SOX5P35711 763 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 POU5F1Q01860 360 aaKnown RBP15.27■□□□□ 0.03
ZIC4-215ENST00000493664 IFFO1Q0D2I5 559 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 C6orf89Q6UWU4 347 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 SYCE1Q8N0S2 351 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 EIF1ADQ8N9N8 165 aaKnown RBP15.27■□□□□ 0.03
ZIC4-215ENST00000493664 ATP8B4Q8TF62 1192 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 BORCS6Q96GS4 357 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 CABS1Q96KC9 395 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 THAP2Q9H0W7 228 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 SLITRK6Q9H5Y7 841 aa15.27■□□□□ 0.03
ZIC4-215ENST00000493664 TAF1LQ8IZX4 1826 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 SMIM23A6NLE4 172 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 UBXN2AP68543 259 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 PLS1Q14651 629 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 CERKLQ49MI3 558 aaPredicted RBP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 SLC30A5Q8TAD4 765 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 AMNQ9BXJ7 453 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 OSBPL7Q9BZF2 842 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 CD248Q9HCU0 757 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 AFF2P51816 1311 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 F5H6K3 240 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 DDX3YO15523 660 aaKnown RBP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 FAM13AO94988 1023 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 KLRC3Q07444 240 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 ACTN3Q08043 901 aaPredicted RBP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 AP3B2Q13367 1082 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 BIRC3Q13489 604 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 Q4G0T1 1027 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 UBAP2Q5T6F2 1119 aaKnown RBP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 YTHDF3Q7Z739 585 aaKnown RBP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.03
ZIC4-215ENST00000493664 COG5Q9UP83 839 aa15.26■□□□□ 0.03
ZIC4-215ENST00000493664 A0A0A6YYK5 440 aaPredicted RBP15.25■□□□□ 0.03
ZIC4-215ENST00000493664 SLC16A3O15427 465 aaKnown RBP15.25■□□□□ 0.03
ZIC4-215ENST00000493664 CAND2O75155 1236 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 FMO5P49326 533 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 BMT2Q1RMZ1 405 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 FBXO11Q86XK2 927 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 UHMK1Q8TAS1 419 aaKnown RBP15.25■□□□□ 0.03
ZIC4-215ENST00000493664 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
ZIC4-215ENST00000493664 ALG3Q92685 438 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 FMO2Q99518 471 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 GPR88Q9GZN0 384 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 GLT8D2Q9H1C3 349 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 VCPKMTQ9H867 229 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 PNMA2Q9UL42 364 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 OPLAHO14841 1288 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 PSMC2P35998 433 aaKnown RBP15.25■□□□□ 0.03
ZIC4-215ENST00000493664 PLTPP55058 493 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 DDR1Q08345 913 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 VPS72Q15906 364 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 CCDC121Q6ZUS5 278 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 RFFLQ8WZ73 363 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 SNX24Q9Y343 169 aa15.25■□□□□ 0.03
ZIC4-215ENST00000493664 TLDC2A0PJX2 215 aa15.24■□□□□ 0.03
ZIC4-215ENST00000493664 DNM1LO00429 736 aa15.24■□□□□ 0.03
ZIC4-215ENST00000493664 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms