RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 PPP1R16BQ96T49 567 aa15.21■□□□□ 0.03
IRF1-210ENST00000493208 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.03
IRF1-210ENST00000493208 RC3H2Q9HBD1 1191 aaKnown RBP15.21■□□□□ 0.03
IRF1-210ENST00000493208 SUCLA2Q9P2R7 463 aaPredicted RBP15.21■□□□□ 0.03
IRF1-210ENST00000493208 DAXXQ9UER7 740 aaPredicted RBP15.21■□□□□ 0.03
IRF1-210ENST00000493208 NOL7Q9UMY1 257 aaKnown RBP15.21■□□□□ 0.03
IRF1-210ENST00000493208 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
IRF1-210ENST00000493208 MYH9P35579 1960 aaKnown RBP15.2■□□□□ 0.02
IRF1-210ENST00000493208 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 CTDNEP1O95476 244 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
IRF1-210ENST00000493208 RBM25P49756 843 aaKnown RBP15.2■□□□□ 0.02
IRF1-210ENST00000493208 KRT17Q04695 432 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 TFDP1Q14186 410 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 TARBP2Q15633 366 aaKnown RBP15.2■□□□□ 0.02
IRF1-210ENST00000493208 UGCGQ16739 394 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 LEXMQ3ZCV2 418 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 KRT40Q6A162 431 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 B3GNT9Q6UX72 402 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 RHPN2Q8IUC4 686 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 PABPC5Q96DU9 382 aaKnown RBP15.2■□□□□ 0.02
IRF1-210ENST00000493208 LXNQ9BS40 222 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 OSBPL7Q9BZF2 842 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 STK39Q9UEW8 545 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 CUL9Q8IWT3 2517 aa15.2■□□□□ 0.02
IRF1-210ENST00000493208 CHD9Q3L8U1 2897 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 UNC80Q8N2C7 3258 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 C9IYK1 514 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 KCNA5P22460 613 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 TFF2Q03403 129 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 MXD4Q14582 209 aaPredicted RBP15.19■□□□□ 0.02
IRF1-210ENST00000493208 RABEP1Q15276 862 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 TWF2Q6IBS0 349 aaKnown RBP15.19■□□□□ 0.02
IRF1-210ENST00000493208 CATSPER4Q7RTX7 472 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 RTN4RL1Q86UN2 441 aaPredicted RBP15.19■□□□□ 0.02
IRF1-210ENST00000493208 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 LINC01465Q8N7H1 131 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 LINC01599Q8WXQ3 324 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 PGBD4Q96DM1 585 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 ADAMTS10Q9H324 1103 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 FOXP1Q9H334 677 aaPredicted RBP15.19■□□□□ 0.02
IRF1-210ENST00000493208 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 VAV3Q9UKW4 847 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 MRPL42Q9Y6G3 142 aaKnown RBP15.19■□□□□ 0.02
IRF1-210ENST00000493208 PTPRSQ13332 1948 aa15.19■□□□□ 0.02
IRF1-210ENST00000493208 RALGAPA2Q2PPJ7 1873 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 IGKV6-21A0A0C4DH24 114 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 A0A0U1RQF3 1178 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 BMP1P13497 986 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 FDPSP14324 419 aaKnown RBP15.18■□□□□ 0.02
IRF1-210ENST00000493208 PHKA2P46019 1235 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 TRAPPC10P48553 1259 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 MCM2P49736 904 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 FAM189BP81408 668 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 NR5A1Q13285 461 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 XKR9Q5GH70 373 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 SPRED2Q7Z698 418 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 CCDC83Q8IWF9 413 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 TPH2Q8IWU9 490 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 OXER1Q8TDS5 423 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 GJA10Q969M2 543 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 NLRP4Q96MN2 994 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 MTRQ99707 1265 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 TTC12Q9H892 705 aaPredicted RBP15.18■□□□□ 0.02
IRF1-210ENST00000493208 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 PLAGL2Q9UPG8 496 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 COL4A3BPQ9Y5P4 624 aa15.18■□□□□ 0.02
IRF1-210ENST00000493208 COL4A4P53420 1690 aaPredicted RBP15.18■□□□□ 0.02
IRF1-210ENST00000493208 A0A0C4DFX4 3053 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
IRF1-210ENST00000493208 BTBD18B2RXH4 712 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 EDIL3O43854 480 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 DGAT1O75907 488 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 ERLIN2O94905 339 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 XRCC6P12956 609 aaKnown RBP eCLIP15.17■□□□□ 0.02
IRF1-210ENST00000493208 TXKP42681 527 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 ANO5Q75V66 913 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 CRIPAKQ8N1N5 446 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 TMEM87AQ8NBN3 555 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 RNF169Q8NCN4 708 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 CNNM3Q8NE01 707 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 ZNF558Q96NG5 402 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 POP1Q99575 1024 aaKnown RBP15.17■□□□□ 0.02
IRF1-210ENST00000493208 CDCA3Q99618 268 aaPredicted RBP15.17■□□□□ 0.02
IRF1-210ENST00000493208 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 ANKEF1Q9NU02 776 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 CLDND1Q9NY35 253 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 PIN4Q9Y237 131 aaKnown RBP15.17■□□□□ 0.02
IRF1-210ENST00000493208 LZTS1Q9Y250 596 aa15.17■□□□□ 0.02
IRF1-210ENST00000493208 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
IRF1-210ENST00000493208 TTC3P53804 2025 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms