RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PPP1R16BQ96T49 567 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 MTRQ99707 1265 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 ATP6V0A4Q9HBG4 840 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 SUCLA2Q9P2R7 463 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 LRWD1Q9UFC0 647 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 DBR1Q9UK59 544 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 ST3GAL5Q9UNP4 418 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 INSL6Q9Y581 213 aa11.89□□□□□ -0.51
CDC42SE1-206ENST00000492796 ENPP3O14638 875 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 MED24O75448 989 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 HSP90AA1P07900 732 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 DARSP14868 501 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 MYOGP15173 224 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 RARRES1P49788 294 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 TMCO2Q7Z6W1 182 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 PSPC1Q8WXF1 523 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 LINC01599Q8WXQ3 324 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 GCOM2Q9BZD3 368 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 INO80BQ9C086 356 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 COL4A3BPQ9Y5P4 624 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 MYH15Q9Y2K3 1946 aa11.88□□□□□ -0.51
CDC42SE1-206ENST00000492796 TTC3P53804 2025 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 RALGAPA2Q2PPJ7 1873 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 DENND3A2RUS2 1198 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 ZBTB39O15060 712 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 ASAP2O43150 1006 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 STX6O43752 255 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 STAG3L1P0CL83 205 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 SFPQP23246 707 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 CCT6AP40227 531 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 KRT79Q5XKE5 535 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 FERMT3Q86UX7 667 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 NPAS4Q8IUM7 802 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 SNX29Q8TEQ0 813 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 NLRP4Q96MN2 994 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 YME1L1Q96TA2 773 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 RGS18Q9NS28 235 aa11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-206ENST00000492796 A0A087WZ62 844 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 LCHNA4D1U4 455 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 LINC01553A4QN01 128 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 UPP2O95045 317 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 SARSP49591 514 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 TAP1Q03518 808 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 LAMTOR4Q0VGL1 99 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 RESTQ13127 1097 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 MXD4Q14582 209 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 IL17AQ16552 155 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 SLC24A5Q71RS6 500 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 RTN4RL1Q86UN2 441 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 MCPH1Q8NEM0 835 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 PRPF31Q8WWY3 499 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 TMEM143Q96AN5 459 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 AK8Q96MA6 479 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 GAS2L1Q99501 681 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 FDXACB1Q9BRP7 624 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 NLRC5Q86WI3 1866 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 ADGRA3Q8IWK6 1321 aa11.86□□□□□ -0.51
CDC42SE1-206ENST00000492796 ARHGEF35A5YM69 484 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 VWA3AA6NCI4 1184 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 RBAK-RBAKDNI3L0D1 243 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 SLC26A4O43511 780 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 MGEA5O60502 916 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 FOSL2P15408 326 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 TFDP1Q14186 410 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 DSC3Q14574 896 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 PCBP1Q15365 356 aaKnown RBP eCLIP11.85□□□□□ -0.514e-8■■■□□ 14.6
CDC42SE1-206ENST00000492796 SF3A1Q15459 793 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 KSR1Q8IVT5 923 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 CRIPAKQ8N1N5 446 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 ZNF689Q96CS4 500 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 ZNF668Q96K58 619 aaPredicted RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 SAMD11Q96NU1 681 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 ADAM2Q99965 735 aa11.85□□□□□ -0.51
CDC42SE1-206ENST00000492796 ELAC1Q9H777 363 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms