RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 TNFRSF25Q93038 417 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
SS18L1-205ENST00000492466 UNC45AQ9H3U1 944 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 COL1A2P08123 1366 aa16.48■□□□□ 0.23
SS18L1-205ENST00000492466 C19orf67A6NJJ6 358 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 NCK2O43639 380 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 HSP90AA1P07900 732 aaKnown RBP16.47■□□□□ 0.23
SS18L1-205ENST00000492466 MCM7P33993 719 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 PLA2G5P39877 138 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 NCAPH2Q6IBW4 605 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 NOSTRINQ8IVI9 506 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 SLFN12Q8IYM2 578 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 ETNPPLQ8TBG4 499 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 FAM167AQ96KS9 214 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 FAM20AQ96MK3 541 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 MBOAT7Q96N66 472 aa16.47■□□□□ 0.23
SS18L1-205ENST00000492466 C9IYK1 514 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 LINC01565O15544 149 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 TBX10O75333 385 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 GPR32O75388 356 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 PSMD10O75832 226 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 STAG3L1P0CL83 205 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 IRS1P35568 1242 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 SARSP49591 514 aaKnown RBP16.46■□□□□ 0.23
SS18L1-205ENST00000492466 NFX1Q12986 1120 aaKnown RBP16.46■□□□□ 0.23
SS18L1-205ENST00000492466 ADAM15Q13444 863 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
SS18L1-205ENST00000492466 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 RDM1Q8NG50 284 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 BBXQ8WY36 941 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-205ENST00000492466 RGS18Q9NS28 235 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 ST3GAL5Q9UNP4 418 aa16.46■□□□□ 0.23
SS18L1-205ENST00000492466 ARIH1Q9Y4X5 557 aaPredicted RBP16.46■□□□□ 0.23
SS18L1-205ENST00000492466 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
SS18L1-205ENST00000492466 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
SS18L1-205ENST00000492466 TBX3O15119 743 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 RPS6KA5O75582 802 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 FAM189BP81408 668 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 PRKCEQ02156 737 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
SS18L1-205ENST00000492466 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 FAM43BQ6ZT52 329 aaPredicted RBP16.45■□□□□ 0.22
SS18L1-205ENST00000492466 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 ADGRD2Q7Z7M1 963 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 FAM228AQ86W67 206 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 LINC01465Q8N7H1 131 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 ADAM2Q99965 735 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 KCNMB3Q9NPA1 279 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 PRKAG3Q9UGI9 489 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 SEPT9Q9UHD8 586 aaPredicted RBP16.45■□□□□ 0.22
SS18L1-205ENST00000492466 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
SS18L1-205ENST00000492466 FNDC1Q4ZHG4 1894 aaPredicted RBP16.45■□□□□ 0.22
SS18L1-205ENST00000492466 MBTPS2O43462 519 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 ZNF862O60290 1169 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 CSPG5O95196 566 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 VTNP04004 478 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 OATP04181 439 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-205ENST00000492466 CRYBB1P53674 252 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-205ENST00000492466 DSC3Q14574 896 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 KIZQ2M2Z5 673 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 FAM102BQ5T8I3 360 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 LARP1BQ659C4 914 aaKnown RBP16.44■□□□□ 0.22
SS18L1-205ENST00000492466 ADHFE1Q8IWW8 467 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 POF1BQ8WVV4 589 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 MSLNLQ96KJ4 702 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
SS18L1-205ENST00000492466 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 CEP131Q9UPN4 1083 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 PLXNA4Q9HCM2 1894 aa16.44■□□□□ 0.22
SS18L1-205ENST00000492466 DKC1O60832 514 aaKnown RBP eCLIP16.43■□□□□ 0.22
SS18L1-205ENST00000492466 PDCP20941 246 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 TXKP42681 527 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 PPP2R5CQ13362 524 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 CLUL1Q15846 466 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 SLC24A5Q71RS6 500 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 OSMRQ99650 979 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 ADAMTS10Q9H324 1103 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 IGFLR1Q9H665 355 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 NRBP2Q9NSY0 501 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 CLEC1BQ9P126 229 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 PCDHB7Q9Y5E2 793 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
SS18L1-205ENST00000492466 PRR33A8MZF0 331 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 GPR182O15218 404 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 EYA4O95677 639 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 CLCN3P51790 818 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 ZNF174Q15697 407 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 UGCGQ16739 394 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 METTL13Q8N6R0 699 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 FAM122AQ96E09 287 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 CWH43Q9H720 699 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 C1orf112Q9NSG2 853 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 RNF19AQ9NV58 838 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 VAV3Q9UKW4 847 aa16.42■□□□□ 0.22
SS18L1-205ENST00000492466 LRFN2Q9ULH4 789 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms