RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TMEM191CA6NGB0 347 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 FAM90A27PA6NNH2 459 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 ACOT7O00154 380 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 PLSCR1O15162 318 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 GSTA4O15217 222 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 TGM5O43548 720 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 CDC14BO60729 498 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 C4BPAP04003 597 aaKnown RBP4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 NCLP19338 710 aaKnown RBP4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 CNGA1P29973 690 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 EVA1CP58658 441 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 HHEXQ03014 270 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 STRN3Q13033 797 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 TUSC3Q13454 348 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 FIGNQ5HY92 759 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 KCTD1Q719H9 257 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 TRIM48Q8IWZ4 208 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 C2orf69Q8N8R5 385 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 CHTF18Q8WVB6 975 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 CLIP3Q96DZ5 547 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 TTPALQ9BTX7 342 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 CARD11Q9BXL7 1154 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 SPTLC3Q9NUV7 552 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 WASF3Q9UPY6 502 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 B3GALT1Q9Y5Z6 326 aa4.1□□□□□ -1.75
HMGB1P30-201ENST00000492455 RASSF10A6NK89 507 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 H0Y858 1186 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 KRIT1O00522 736 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 CLASP2O75122 1294 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 KNG1P01042 644 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 CDK11BP21127 795 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 HIBADHP31937 336 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 RPS19P39019 145 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 IRF9Q00978 393 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 STAT4Q14765 748 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 MAMDC4Q6UXC1 1216 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 Q6ZSN1 163 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 DDX46Q7L014 1031 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 DTX3Q8N9I9 347 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 TTLL11Q8NHH1 800 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 ZCRB1Q8TBF4 217 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 BOCQ9BWV1 1114 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 C12orf65Q9H3J6 166 aaKnown RBP4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 CABP5Q9NP86 173 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 EMC7Q9NPA0 242 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 PARPBPQ9NWS1 579 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 OXSMQ9NWU1 459 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 HSPBP1Q9NZL4 362 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 ZFP69BQ9UJL9 534 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 PHLDB1Q86UU1 1377 aa4.09□□□□□ -1.75
HMGB1P30-201ENST00000492455 hCG_2014768A0A024R1R8 64 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 SLC12A8A0AV02 714 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 GPR39O43194 453 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 FKBP9O95302 570 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 PTPN1P18031 435 aaKnown RBP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 FBLP22087 321 aaKnown RBP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 LSSP48449 732 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 GRIN1Q05586 938 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZMAT1Q5H9K5 638 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 CATSPEREQ5SY80 951 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 PHF19Q5T6S3 580 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 FNDC7Q5VTL7 733 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 ESRP1Q6NXG1 681 aaKnown RBP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 FKBP9P1Q75LS8 142 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 PROSER1Q86XN7 944 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 OR2W6PQ8NHA6 318 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 PCSK5Q92824 1860 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 GPR101Q96P66 508 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 KATNBL1Q9H079 304 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 MS4A5Q9H3V2 200 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 THG1LQ9NWX6 298 aaKnown RBP4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 ARHGAP20Q9P2F6 1191 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 ATP23Q9Y6H3 246 aa4.08□□□□□ -1.76
HMGB1P30-201ENST00000492455 SCDO00767 359 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 KRT37O76014 449 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 PTX3P26022 381 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 GLRBP48167 497 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 SCNN1BP51168 640 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 FSTL1Q12841 308 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ARHGAP44Q17R89 818 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 PAN2Q504Q3 1202 aaKnown RBP4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 CT47A1Q5JQC4 288 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZNF627Q7L945 461 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ULK2Q8IYT8 1036 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 NLGN4XQ8N0W4 816 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZNF808Q8N4W9 903 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 EFHBQ8N7U6 833 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 KIAA1958Q8N8K9 716 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 COG1Q8WTW3 980 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ELF4Q99607 663 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 DPYSL5Q9BPU6 564 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZNF703Q9H7S9 590 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 IFT22Q9H7X7 185 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZMAT4Q9H898 229 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 VTA1Q9NP79 307 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 RBPJLQ9UBG7 517 aa4.07□□□□□ -1.76
HMGB1P30-201ENST00000492455 NR2E1Q9Y466 385 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms