RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 RIC8AQ9NPQ8 531 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 SH3GLB2Q9NR46 395 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 USP40Q9NVE5 1235 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.96□□□□□ -1.3
CCDC6-202ENST00000491922 ANAPC4Q9UJX5 808 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 G3BP2Q9UN86 482 aaKnown RBP6.96□□□□□ -1.3
CCDC6-202ENST00000491922 PHF8Q9UPP1 1060 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 USP20Q9Y2K6 914 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 TBX22Q9Y458 520 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 PCDHGA4Q9Y5G9 962 aa6.96□□□□□ -1.3
CCDC6-202ENST00000491922 RPTORQ8N122 1335 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 POTEFA5A3E0 1075 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 PRKAB2O43741 272 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 ECE2O60344 883 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 CSF1RP07333 972 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 POTEIP0CG38 1075 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 CACNA2D1P54289 1103 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 PLTPP55058 493 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 OCRLQ01968 901 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 USP4Q13107 963 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 MYBPC3Q14896 1274 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 MTFR1Q15390 333 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 ACBD5Q5T8D3 534 aaPredicted RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 POTEEQ6S8J3 1075 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 ZDHHC24Q6UX98 284 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 UNC13DQ70J99 1090 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 LONP2Q86WA8 852 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 VSIG1Q86XK7 387 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 FAM133AQ8N9E0 248 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 NCSTNQ92542 709 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 MKL1Q969V6 931 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 AZIN2Q96A70 460 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 HES6Q96HZ4 224 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 NDNQ99608 321 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 DDX23Q9BUQ8 820 aaKnown RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 DNAAF2Q9NVR5 837 aaKnown RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 AMFRQ9UKV5 643 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 PCDHA4Q9UN74 947 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 COL4A3BPQ9Y5P4 624 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 ANKRD36CQ5JPF3 1778 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 MYH3P11055 1940 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 TMEM120BA0PK00 339 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 NBPF26B4DH59 902 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 RIPK2O43353 540 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 FGGP02679 453 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 FAM163BP0C2L3 166 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 KCNA3P22001 575 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 TPP2P29144 1249 aaPredicted RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 GSTT1P30711 240 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 RCN2Q14257 317 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 LRRC14Q15048 493 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 FOXB2Q5VYV0 432 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 BARGINQ6ZT62 677 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 NT5DC3Q86UY8 548 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 ECHDC2Q86YB7 292 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 LCORLQ8N3X6 602 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 SRBD1Q8N5C6 995 aaKnown RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 TTLL11Q8NHH1 800 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 MGARPQ8TDB4 240 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 LRRC8CQ8TDW0 803 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 LZICQ8WZA0 190 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 RAPGEF4Q8WZA2 1011 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 MAGEB18Q96M61 343 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 NLRP3Q96P20 1036 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 TGS1Q96RS0 853 aaKnown RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 TMEM60Q9H2L4 133 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 NMRK1Q9NWW6 199 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 LARSQ9P2J5 1176 aaKnown RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 SEC63Q9UGP8 760 aaKnown RBP6.95□□□□□ -1.3
CCDC6-202ENST00000491922 BLOC1S6Q9UL45 172 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 INTUQ9ULD6 942 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 GMEB1Q9Y692 573 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 PITPNM2Q9BZ72 1349 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 PCDH11XQ9BZA7 1347 aa6.95□□□□□ -1.3
CCDC6-202ENST00000491922 SIGLEC16A6NMB1 481 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 KIAA0391O15091 583 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 GNA14O95837 355 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 RARGP13631 454 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 GM2AP17900 193 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 PHKA1P46020 1223 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SLCO1A2P46721 670 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 POLGP54098 1239 aaPredicted RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ARID5AQ03989 594 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 MGAT5Q09328 741 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 KPNB1Q14974 876 aaKnown RBP6.94□□□□□ -1.3
CCDC6-202ENST00000491922 DBN1Q16643 649 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 GSTA3Q16772 222 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SPDYAQ5MJ70 313 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 LDHAL6AQ6ZMR3 332 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 BICDL1Q6ZP65 573 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SV2BQ7L1I2 683 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 JAMLQ86YT9 394 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ANKLE1Q8NAG6 615 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 SPATA5Q8NB90 893 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 FBXO25Q8TCJ0 367 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 UCMAQ8WVF2 138 aa6.94□□□□□ -1.3
CCDC6-202ENST00000491922 ARHGEF2Q92974 986 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms