RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	PDHB	P11177	359 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	CCNH	P51946	323 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	MRPS35	P82673	323 aa	Known RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	MSL1	Q68DK7	614 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	KRT25	Q7Z3Z0	450 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	MYLK2	Q9H1R3	596 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	AAAS	Q9NRG9	546 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	IL17RB	Q9NRM6	502 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	UNC5C	O95185	931 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	PLEKHA8P1	O95397	391 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	KLK7	P49862	253 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	BTK	Q06187	659 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	MGAT5	Q09328	741 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	SPA17	Q15506	151 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	CCDC57	Q2TAC2	916 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	EAPP	Q56P03	285 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	PNMA8A	Q86V59	439 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	HOOK3	Q86VS8	718 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	DZIP3	Q86Y13	1208 aa	Known RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	RNF25	Q96BH1	459 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	RSRC1	Q96IZ7	334 aa	Known RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	NAP1L4	Q99733	375 aa	Known RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	UBAC1	Q9BSL1	405 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	BLZF1	Q9H2G9	400 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	NFU1	Q9UMS0	254 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	PGRMC1	O00264	195 aa	Known RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	MARCH6	O60337	910 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	PEX11A	O75192	247 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	HOXD13	P35453	343 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	SLC1A4	P43007	532 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	IFIT5	Q13325	482 aa	Known RBP	11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	LMO3	Q8TAP4	145 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	TMEM60	Q9H2L4	133 aa		11.17	□□□□□ -0.62
SREBF2-208	ENST00000491541	KLRC1	P26715	233 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	RPS6KA3	P51812	740 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	CYP27A1	Q02318	531 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	TMEM63B	Q5T3F8	832 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	IRAK1BP1	Q5VVH5	260 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	CCDC197	Q8NCU1	140 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	LZIC	Q8WZA0	190 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	NACAP1	Q9BZK3	213 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	NAGPA	Q9UK23	515 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	CYTH3	O43739	400 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	AMPD3	Q01432	767 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	MTFR1	Q15390	333 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	DLGAP5	Q15398	846 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	CMTR1	Q8N1G2	835 aa	Known RBP	11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	ZNF594	Q96JF6	807 aa	Predicted RBP	11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	ERP44	Q9BS26	406 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	GREM2	Q9H772	168 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	CNNM1	Q9NRU3	951 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	MKS1	Q9NXB0	559 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	PARP2	Q9UGN5	583 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	EIF4E1B	A6NMX2	242 aa	Known RBP	11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	TBX3	O15119	743 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	SNUPN	O95149	360 aa	Known RBP	11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	COPS2	P61201	443 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	ADRM1	Q16186	407 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	STKLD1	Q8NE28	680 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	CCDC42	Q96M95	316 aa		11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	NR1H4	Q96RI1	486 aa	Predicted RBP	11.16	□□□□□ -0.62
SREBF2-208	ENST00000491541	EIF3D	O15371	548 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	ATP9B	O43861	1147 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	ZNF862	O60290	1169 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	PALM	O75781	387 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	ANO7	Q6IWH7	933 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	IRGC	Q6NXR0	463 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	B3GNT9	Q6UX72	402 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	CSGALNACT2	Q8N6G5	542 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	EPB41L5	Q9HCM4	733 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	SMARCAL1	Q9NZC9	954 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	PHF24	Q9UPV7	400 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	COL4A3BP	Q9Y5P4	624 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	RLF	Q13129	1914 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	MBD4	O95243	580 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	AUH	Q13825	339 aa	Known RBP	11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	TBC1D25	Q3MII6	688 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	FAM83B	Q5T0W9	1011 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	MAGEB18	Q96M61	343 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	PDZD7	Q9H5P4	517 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	LRRC4C	Q9HCJ2	640 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	PODXL	O00592	558 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	EXOC3	O60645	756 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	RAP1GDS1	P52306	607 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	SLC9C1	Q4G0N8	1177 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	ANKS1B	Q7Z6G8	1248 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	CPLX4	Q7Z7G2	160 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	MZB1	Q8WU39	189 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	SPAG5	Q96R06	1193 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	LUC7L	Q9NQ29	371 aa	Known RBP	11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	OLFML3	Q9NRN5	406 aa		11.15	□□□□□ -0.62
SREBF2-208	ENST00000491541	ESYT3	A0FGR9	886 aa		11.14	□□□□□ -0.63
SREBF2-208	ENST00000491541	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF2-208	ENST00000491541	LMNA	P02545	664 aa	Known RBP	11.14	□□□□□ -0.63
SREBF2-208	ENST00000491541	OR52Z1	P0C646	297 aa		11.14	□□□□□ -0.63

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