RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 A0A0G2JNJ9 132 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 TCRBV5S4A2TA0A5A2 114 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 NPIPB8E9PQR5 432 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MAN2B1O00754 1011 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MATN3O15232 486 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 IPO8O15397 1037 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 FOXP2O15409 715 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 DAPK3O43293 454 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 FOXS1O43638 330 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 OPA1O60313 960 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 H2AFYO75367 372 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 RASGRP1O95267 797 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 IGHDP01880 384 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MMEP08473 750 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 TACR2P21452 398 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 CSF2RBP32927 897 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MSX2P35548 267 aaPredicted RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 FLT3P36888 993 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MRE11P49959 708 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 STAT5BP51692 787 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 EPHA5P54756 1037 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 TGFB2P61812 414 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MAP3K12Q12852 859 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 MOGSQ13724 837 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 GRM7Q14831 915 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ZNF174Q15697 407 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 LSM12Q3MHD2 195 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 FOXB2Q5VYV0 432 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 UBE2R2Q712K3 238 aaPredicted RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 DDX53Q86TM3 631 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 PROSER1Q86XN7 944 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 REXO1L1PQ8IX06 675 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 THEMISQ8N1K5 641 aaPredicted RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 D2HGDHQ8N465 521 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 IGSF22Q8N9C0 903 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 SH3RF2Q8TEC5 729 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 EXTL1Q92935 676 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ARL8AQ96BM9 186 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ZNF669Q96BR6 464 aaPredicted RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 MBD6Q96DN6 1003 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 RPL10LQ96L21 214 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 FAM193BQ96PV7 902 aaPredicted RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 TUBGCP5Q96RT8 1024 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 KIAA1683Q9H0B3 1180 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 PCIF1Q9H4Z3 704 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 CABP5Q9NP86 173 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 KCND1Q9NSA2 647 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 IFT57Q9NWB7 429 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 Q9UFV3 132 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 SFMBT1Q9UHJ3 866 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 FBXO10Q9UK96 956 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ISY1Q9ULR0 285 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 RBM8AQ9Y5S9 174 aaKnown RBP2.53□□□□□ -2
SNRNP40-207ENST00000491106 SLC4A7Q9Y6M7 1214 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 CDC42BPAQ5VT25 1732 aa2.53□□□□□ -2
SNRNP40-207ENST00000491106 ARHGEF5Q12774 1597 aa2.53□□□□□ -2.01
SNRNP40-207ENST00000491106 CDK13Q14004 1512 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MAGI1Q96QZ7 1491 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MBD5Q9P267 1494 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MRC2Q9UBG0 1479 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 CCDC144AA2RUR9 1427 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 NUP160Q12769 1436 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 RPGRIP1LQ68CZ1 1315 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 A0A1W2PRX2 142 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 CAPN14A8MX76 684 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MAFGO15525 162 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ARHGAP6O43182 974 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 SUV39H1O43463 412 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 CLASP2O75122 1294 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 FRAT2O75474 233 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 BCAR3O75815 825 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 CNOT4O95628 575 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 AMY2AP04746 511 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 TNFRSF1AP19438 455 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 AMY2BP19961 511 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 PTMSP20962 102 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 APEX1P27695 318 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MC4RP32245 332 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 RPS19P39019 145 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ADAM15Q13444 863 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 FHL2Q14192 279 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 SART3Q15020 963 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 PCOLCEQ15113 449 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 RNF151Q2KHN1 245 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ZC3H12BQ5HYM0 836 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 C20orf194Q5TEA3 1177 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 AGBL4Q5VU57 503 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 NBPF6Q5VWK0 638 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 GRAMD4Q6IC98 578 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 TIGD7Q6NT04 549 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 LRSAM1Q6UWE0 723 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 CXXC5Q7LFL8 322 aaKnown RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MORC1Q86VD1 984 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 FUKQ8N0W3 1084 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 ZSWIM2Q8NEG5 633 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 FRAT1Q92837 279 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 E2F7Q96AV8 911 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 MRFAP1L1Q96HT8 127 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 WNK4Q96J92 1243 aa2.52□□□□□ -2.01
SNRNP40-207ENST00000491106 NBPF4Q96M43 638 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms