RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 CBWD5Q5RIA9 395 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 DENND2CQ68D51 928 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 TMC3Q7Z5M5 1100 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 SYCE1Q8N0S2 351 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 TBC1D22AQ8WUA7 517 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 SLC20A1Q8WUM9 679 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 RUBCNQ92622 972 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 PSMD1Q99460 953 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 LRP5O75197 1615 aa12.08□□□□□ -0.47
VPS72-205ENST00000491094 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 MSH4O15457 936 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 MMEP08473 750 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 CHN1P15882 459 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 PSMC2P35998 433 aaKnown RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 GJC1P36383 396 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 THOC1Q96FV9 657 aaKnown RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 SEMA4AQ9H3S1 761 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 TYW1Q9NV66 732 aaKnown RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 hCG_1984214I3L0E3 225 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 MEIS2O14770 477 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 FERP16591 822 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 GCLMP48507 274 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 ZFYVE27Q5T4F4 411 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 ZNF713Q8N859 430 aaPredicted RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 KRT35Q92764 455 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 CCDC127Q96BQ5 260 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 MRRFQ96E11 262 aaKnown RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 AMNQ9BXJ7 453 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 SPOPO43791 374 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 FNTAP49354 379 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 ALG3Q92685 438 aa12.08□□□□□ -0.48
VPS72-205ENST00000491094 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
VPS72-205ENST00000491094 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 DDTLA6NHG4 134 aaPredicted RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 F8VZ95 297 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 CCDC188H7C350 402 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 PDXKO00764 312 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 ACSL3O95573 720 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 SOX5P35711 763 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 SSR1P43307 286 aaKnown RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 ZKSCAN8Q15776 578 aaPredicted RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 MREGQ8N565 214 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 POP1Q99575 1024 aaKnown RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 ALG6Q9Y672 507 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 CALCAP01258 141 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 RPA1P27694 616 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 RINT1Q6NUQ1 792 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 CNPY4Q8N129 248 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 BANK1Q8NDB2 785 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 KAT5Q92993 513 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 HVCN1Q96D96 273 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 NCAPGQ9BPX3 1015 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 FAM118BQ9BPY3 351 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 PAIP2Q9BPZ3 127 aaKnown RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 ADAM33Q9BZ11 813 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 INTS9Q9NV88 658 aaKnown RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 ASTN1O14525 1302 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 H0YGN5 161 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 TRAPPC3O43617 180 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 LRCH2Q5VUJ6 765 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 SUGP1Q8IWZ8 645 aaKnown RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 FAM84AQ96KN4 292 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 PRMT1Q99873 361 aaKnown RBP12.07□□□□□ -0.48
VPS72-205ENST00000491094 RAB17Q9H0T7 212 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 NFS1Q9Y697 457 aa12.07□□□□□ -0.48
VPS72-205ENST00000491094 TGFB1I1O43294 461 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 FMO5P49326 533 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 PMS2P54278 862 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 C2CD6Q53TS8 623 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 C10orf76Q5T2E6 689 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 CD302Q8IX05 232 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 EPS8L3Q8TE67 593 aaKnown RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 TEKT1Q969V4 418 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 TMEM59LQ9UK28 342 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 GABPAQ06546 454 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 BIRC3Q13489 604 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 SIX2Q9NPC8 291 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms