RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TAF2Q6P1X5 1199 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 MAEAQ7L5Y9 396 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 DAW1Q8N136 415 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 PPP1R13LQ8WUF5 828 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 ABHD8Q96I13 439 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 POLR3FQ9H1D9 316 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-230ENST00000491028 SUGCTQ9HAC7 445 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 PARVGQ9HBI0 331 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 EXOC1Q9NV70 894 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 LARSQ9P2J5 1176 aaKnown RBP20.63■□□□□ 0.89
MCF2L-230ENST00000491028 EVPLQ92817 2033 aa20.63■□□□□ 0.89
MCF2L-230ENST00000491028 RSPH10B2B2RC85 870 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 TREHO43280 583 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 RHOBTB3O94955 611 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 RPLP2P05387 115 aaKnown RBP20.62■□□□□ 0.89
MCF2L-230ENST00000491028 RSPH10BP0C881 870 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 CYP2C9P11712 490 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 ARL2P36404 184 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 COASYQ13057 564 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 LRRC71Q8N4P6 559 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 METTL13Q8N6R0 699 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 TRIML1Q8N9V2 468 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 PSPC1Q8WXF1 523 aaKnown RBP20.62■□□□□ 0.89
MCF2L-230ENST00000491028 ERCC4Q92889 916 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-230ENST00000491028 MAP7D2Q96T17 732 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 GTPBP4Q9BZE4 634 aaKnown RBP20.62■□□□□ 0.89
MCF2L-230ENST00000491028 SENP6Q9GZR1 1112 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-230ENST00000491028 GPRC5CQ9NQ84 441 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 KCNG1Q9UIX4 513 aa20.62■□□□□ 0.89
MCF2L-230ENST00000491028 TRIP12Q14669 1992 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-230ENST00000491028 MROH7Q68CQ1 1323 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 PLS3P13797 630 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 CDK7P50613 346 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 CLCN3P51790 818 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 EHHADHQ08426 723 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 MXD4Q14582 209 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-230ENST00000491028 PPP2R5AQ15172 486 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 KMT5BQ4FZB7 885 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 C1orf53Q5VUE5 145 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 TMEM143Q96AN5 459 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 IFT74Q96LB3 600 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 ZHX3Q9H4I2 956 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 C11orf49Q9H6J7 331 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 OLFML3Q9NRN5 406 aa20.61■□□□□ 0.89
MCF2L-230ENST00000491028 ASAP2O43150 1006 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 NAMPTP43490 491 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 ZNF200P98182 395 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-230ENST00000491028 PSMD2Q13200 908 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 DMP1Q13316 513 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-230ENST00000491028 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-230ENST00000491028 PTGISQ16647 500 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 HERC4Q5GLZ8 1057 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-230ENST00000491028 NECAB2Q7Z6G3 386 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 SERINC5Q86VE9 423 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 ZNF710Q8N1W2 664 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 MYCT1Q8N699 235 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 DIS3LQ8TF46 1054 aaKnown RBP20.6■□□□□ 0.89
MCF2L-230ENST00000491028 ZBTB10Q96DT7 871 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 SUCLA2Q9P2R7 463 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-230ENST00000491028 NOD1Q9Y239 953 aa20.6■□□□□ 0.89
MCF2L-230ENST00000491028 MAPTP10636 758 aaKnown RBP20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SOX10P56693 466 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 CDC42EP1Q00587 391 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 PTK7Q13308 1070 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 DRP2Q13474 957 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SNX17Q15036 470 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 FAM26FQ5R3K3 315 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 ODR4Q5SWX8 454 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SLC39A5Q6ZMH5 540 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 RUFY4Q6ZNE9 571 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SFR1Q86XK3 245 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 KIAA0319LQ8IZA0 1049 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SLC17A8Q8NDX2 589 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SPIRE2Q8WWL2 714 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 MAN1B1Q9UKM7 699 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 AKT3Q9Y243 479 aa20.59■□□□□ 0.89
MCF2L-230ENST00000491028 SFI1A8K8P3 1242 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 SCP2P22307 547 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 GLRA2P23416 452 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 SMTNP53814 917 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 LAMTOR4Q0VGL1 99 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 TFDP1Q14186 410 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 ZSCAN23Q3MJ62 389 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 RPAINQ86UA6 219 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 RSPH3Q86UC2 560 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 FAM178BQ8IXR5 827 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 FAM126BQ8IXS8 530 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 NME8Q8N427 588 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 ASAP3Q8TDY4 903 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 PRPF31Q8WWY3 499 aaKnown RBP20.58■□□□□ 0.89
MCF2L-230ENST00000491028 PAWRQ96IZ0 340 aaKnown RBP20.58■□□□□ 0.89
MCF2L-230ENST00000491028 POLD4Q9HCU8 107 aa20.58■□□□□ 0.89
MCF2L-230ENST00000491028 H0YCG3 227 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 TLR3O15455 904 aaKnown RBP20.57■□□□□ 0.88
MCF2L-230ENST00000491028 B4GALT4O60513 344 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 CAND2O75155 1236 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 ABCD1P33897 745 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 NCKAP1LP55160 1127 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 PEX3P56589 373 aa20.57■□□□□ 0.88
MCF2L-230ENST00000491028 POU5F1BQ06416 359 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms