RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ECHDC2Q86YB7 292 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 LRRC71Q8N4P6 559 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 AKT3Q9Y243 479 aa17.42■□□□□ 0.38
SCAMP3-208ENST00000490999 FAM86B1E9PN63 330 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 MEIS1O00470 390 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 FAM86B2P0C5J1 330 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 MTHFRP42898 656 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 ADCY7P51828 1080 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 KIAA1841Q6NSI8 718 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 MIS18BP1Q6P0N0 1132 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 TMC5Q6UXY8 1006 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 EXOC6Q8TAG9 804 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 SLC12A7Q9Y666 1083 aa17.41■□□□□ 0.38
SCAMP3-208ENST00000490999 PI15O43692 258 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 MCM5P33992 734 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 ZNF76P36508 570 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 SREBF1P36956 1147 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 NLRP11P59045 1033 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 PLA2G4DQ86XP0 818 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 BCL7CQ8WUZ0 217 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 NCOR2Q9Y618 2525 aa17.4■□□□□ 0.38
SCAMP3-208ENST00000490999 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 ZC3H11AO75152 810 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 EOMESO95936 686 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 CALM1P0DP23 149 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 CALM2P0DP24 149 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 CALM3P0DP25 149 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 BCAR1P56945 870 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 LONRF3Q496Y0 759 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 ERMP1Q7Z2K6 904 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 ZDHHC14Q8IZN3 488 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 VPS52Q8N1B4 723 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 FANCBQ8NB91 859 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 SCLT1Q96NL6 688 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 ZBP1Q9H171 429 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 ADAMTS10Q9H324 1103 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 DZANK1Q9NVP4 752 aa17.39■□□□□ 0.37
SCAMP3-208ENST00000490999 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 IPO5O00410 1097 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 CSDE1O75534 798 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 CXCL14O95715 111 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 ZSCAN20P17040 1043 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 NPR3P17342 541 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 CLCN5P51795 746 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 ANGPT1Q15389 498 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 JAKMIP3Q5VZ66 844 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 PPP1R18Q6NYC8 613 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 CCDC105Q8IYK2 499 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 BBXQ8WY36 941 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 MAP7D2Q96T17 732 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 GABBR1Q9UBS5 961 aa17.38■□□□□ 0.37
SCAMP3-208ENST00000490999 IGLV3-22A0A075B6J6 115 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 ADAMTS3O15072 1205 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 AOC1P19801 751 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 LIFRP42702 1097 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 ATAT1Q5SQI0 421 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 SIX5Q8N196 739 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 LINC01465Q8N7H1 131 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 TMEM87AQ8NBN3 555 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 LPPQ93052 612 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 ZNF577Q9BSK1 485 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 TCEAL9Q9UHQ7 104 aa17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 MAFBQ9Y5Q3 323 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-208ENST00000490999 DENND4AQ7Z401 1863 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 SMCO2A6NFE2 343 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 SPDYE4A6NLX3 237 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 SLC27A2O14975 620 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 NARSO43776 548 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 FOSP01100 380 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 EIF4BP23588 611 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 AP3B2Q13367 1082 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 AAMPQ13685 434 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 EFCAB12Q6NXP0 572 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 CABP7Q86V35 215 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 CYP26B1Q9NR63 512 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 FBXL21Q9UKT6 434 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 INPP5FQ9Y2H2 1132 aa17.36■□□□□ 0.37
SCAMP3-208ENST00000490999 MED19A0JLT2 244 aaPredicted RBP17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 MEIS3P2A8K0S8 358 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 DARSP14868 501 aaKnown RBP17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 GPC3P51654 580 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 FAM43BQ6ZT52 329 aaPredicted RBP17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 CCDC149Q6ZUS6 474 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 NIPA1Q7RTP0 329 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 TMTC2Q8N394 836 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 DTWD2Q8NBA8 298 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 SLC22A17Q8WUG5 538 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 NLRP7Q8WX94 980 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 TCEANC2Q96MN5 208 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 VN1R3Q9BXE9 311 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 GBP3Q9H0R5 595 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms