RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 FAM26DQ5JW98 314 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 FAM102BQ5T8I3 360 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 RUFY4Q6ZNE9 571 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 C1orf186Q6ZWK4 172 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 LRRC8DQ7L1W4 858 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 LRRC71Q8N4P6 559 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 PPP1R13LQ8WUF5 828 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 SCLT1Q96NL6 688 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 SH2D3AQ9BRG2 576 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 PANK2Q9BZ23 570 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 LARSQ9P2J5 1176 aaKnown RBP22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 COL4A3BPQ9Y5P4 624 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 TRPV2Q9Y5S1 764 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 WDR81Q562E7 1941 aa22.01■■□□□ 1.11
SHROOM3-209ENST00000490690 H0YCG3 227 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 PRPF40AO75400 957 aaKnown RBP22■■□□□ 1.11
SHROOM3-209ENST00000490690 CAPN15O75808 1086 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 NDUFA8P51970 172 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 MCM6Q14566 821 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 TRIM71Q2Q1W2 868 aaKnown RBP22■■□□□ 1.11
SHROOM3-209ENST00000490690 CNNM3Q8NE01 707 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 TIGD1Q96MW7 591 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 LBHD1Q9BQE6 289 aaPredicted RBP22■■□□□ 1.11
SHROOM3-209ENST00000490690 KBTBD4Q9NVX7 518 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 TCHHQ07283 1943 aa22■■□□□ 1.11
SHROOM3-209ENST00000490690 KINO60870 393 aaKnown RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 ARL2P36404 184 aa21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 CRYBB1P53674 252 aaPredicted RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 SMTNP53814 917 aa21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 MLLT1Q03111 559 aaPredicted RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 DMP1Q13316 513 aaPredicted RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 MFSD5Q6N075 450 aa21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 RHPN2Q8IUC4 686 aa21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 RPUSD2Q8IZ73 545 aaKnown RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 DHX38Q92620 1227 aaKnown RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 CELF4Q9BZC1 486 aaKnown RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 GCOM2Q9BZD3 368 aaPredicted RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 POLR3FQ9H1D9 316 aaPredicted RBP21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 C2orf40Q9H1Z8 148 aa21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 XPNPEP1Q9NQW7 623 aa21.99■■□□□ 1.11
SHROOM3-209ENST00000490690 A0A087X0B3 334 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 ZNF202O95125 648 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 NAMPTP43490 491 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 PHKA2P46019 1235 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 DHX8Q14562 1220 aaKnown RBP21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 CNNM4Q6P4Q7 775 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 ELOA2Q8IYF1 753 aaPredicted RBP21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 PRPF31Q8WWY3 499 aaKnown RBP21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 NLRP7Q8WX94 980 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 CCDC47Q96A33 483 aaKnown RBP21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 TMEM143Q96AN5 459 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 RUSC1Q9BVN2 902 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 NFKBIZQ9BYH8 718 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 PPP1R12CQ9BZL4 782 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 PARVGQ9HBI0 331 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 SEL1LQ9UBV2 794 aa21.98■■□□□ 1.11
SHROOM3-209ENST00000490690 A0A087WWV3 80 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 FAM13AO94988 1023 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 IQCF3P0C7M6 154 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 GAP43P17677 238 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 GPC3P51654 580 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 NLRP11P59045 1033 aaKnown RBP21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 LAMTOR4Q0VGL1 99 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 PPIGQ13427 754 aaKnown RBP eCLIP21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 ZNF618Q5T7W0 954 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 SRGAP1Q7Z6B7 1085 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 ZBTB8OSQ8IWT0 167 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 DDX12PQ92771 950 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 CDY2AQ9Y6F7 541 aa21.97■■□□□ 1.11
SHROOM3-209ENST00000490690 TRIM43BA6NCK2 446 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 HIP1RO75146 1068 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 VTNP04004 478 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 SFPQP23246 707 aaKnown RBP eCLIP21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 EFNA5P52803 228 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 MKRN4PQ13434 485 aaPredicted RBP21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 KRBA2Q6ZNG9 492 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 CCDC65Q8IXS2 484 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 FMR1NBQ8N0W7 255 aaPredicted RBP21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 APBB2Q92870 758 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 TRIM43Q96BQ3 446 aaPredicted RBP21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 C7orf25Q9BPX7 421 aa21.96■■□□□ 1.11
SHROOM3-209ENST00000490690 ACTN4O43707 911 aaKnown RBP21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 MBD3O95983 291 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 CTSHP09668 335 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 PLS3P13797 630 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 NCBP1Q09161 790 aaKnown RBP21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 MGAT3Q09327 533 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 MAEAQ7L5Y9 396 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 IFNLR1Q8IU57 520 aaPredicted RBP21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 RNF149Q8NC42 400 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 DEPTORQ8TB45 409 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 SPIRE2Q8WWL2 714 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 NLRP4Q96MN2 994 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 REEP2Q9BRK0 252 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 TRIM9Q9C026 710 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 GOLPH3LQ9H4A5 285 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 SERTAD1Q9UHV2 236 aa21.95■■□□□ 1.1
SHROOM3-209ENST00000490690 GPR182O15218 404 aa21.94■■□□□ 1.1
SHROOM3-209ENST00000490690 GPR32O75388 356 aa21.94■■□□□ 1.1
SHROOM3-209ENST00000490690 GLRA2P23416 452 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms