RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TMEM94Q12767 1356 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
SHOX2-205ENST00000490689 MAPK13O15264 365 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 SLC37A4O43826 429 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 GRB10Q13322 594 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 SEPT2Q15019 361 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 KYNUQ16719 465 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 NAALADL2Q58DX5 795 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 BARGINQ6ZT62 677 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 EPM2AIP1Q7L775 607 aaPredicted RBP13.81□□□□□ -0.2
SHOX2-205ENST00000490689 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
SHOX2-205ENST00000490689 ANKRD26Q9UPS8 1709 aa13.81□□□□□ -0.2
SHOX2-205ENST00000490689 FAM196BA6NMK8 535 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 RWDD2BP57060 319 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 MEI1Q5TIA1 1274 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 TTBK2Q6IQ55 1244 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 ARHGAP24Q8N264 748 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 CCDC89Q8N998 374 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 TPCN2Q8NHX9 752 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 GRK7Q8WTQ7 553 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 GOLGA8SH3BPF8 625 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 GOLGA8MH3BSY2 632 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 HSPA6P17066 643 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 IFI35P80217 286 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 ANO3Q9BYT9 981 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 SYNGAP1Q96PV0 1343 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 SLIT1O75093 1534 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 MYCLP12524 364 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 KLRK1P26718 216 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 NMT1P30419 496 aaKnown RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 HSPA9P38646 679 aaKnown RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 DYNLT1P63172 113 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 CDK17Q00537 523 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 QPCTQ16769 361 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 TRIM59Q8IWR1 403 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 RPUSD2Q8IZ73 545 aaKnown RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 ERP27Q96DN0 273 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 SAYSD1Q9NPB0 183 aa13.8□□□□□ -0.2
SHOX2-205ENST00000490689 LARSQ9P2J5 1176 aaKnown RBP13.8□□□□□ -0.2
SHOX2-205ENST00000490689 ATP6V1G2O95670 118 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 CRYMQ14894 314 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 KIAA0825Q8IV33 1275 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 HIPK4Q8NE63 616 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 I3L4J1 428 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SORBS3O60504 671 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 TTLL1O95922 423 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 ITGB3BPQ13352 177 aaPredicted RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SEPT14Q6ZU15 432 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 RHOT2Q8IXI1 618 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 PRCCQ92733 491 aaPredicted RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 C18orf8Q96DM3 657 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 NGLY1Q96IV0 654 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 PARVGQ9HBI0 331 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 RGL1Q9NZL6 768 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 ANAPC7Q9UJX3 599 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 ARL2BPQ9Y2Y0 163 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 PNMA6FA0A0J9YX94 578 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 AGTP01019 485 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 MYBP10242 640 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SKIP12755 728 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 CHRNA3P32297 505 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 BFSP1Q12934 665 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 PLCB4Q15147 1175 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 GDF3Q9NR23 364 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 TRAPPC3O43617 180 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 NSFP46459 744 aaKnown RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 MIIPQ5JXC2 388 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 NUDT12Q9BQG2 462 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 RIOK1Q9BRS2 568 aaKnown RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 SPZ1Q9BXG8 430 aa13.79□□□□□ -0.2
SHOX2-205ENST00000490689 DHX36Q9H2U1 1008 aaKnown RBP13.79□□□□□ -0.2
SHOX2-205ENST00000490689 CFAP69A5D8W1 941 aa13.78□□□□□ -0.2
SHOX2-205ENST00000490689 FAM187AA6NFU0 413 aa13.78□□□□□ -0.2
SHOX2-205ENST00000490689 SGK1O00141 431 aa13.78□□□□□ -0.2
SHOX2-205ENST00000490689 KLRC4O43908 158 aa13.78□□□□□ -0.2
SHOX2-205ENST00000490689 MXI1P50539 228 aa13.78□□□□□ -0.2
SHOX2-205ENST00000490689 GPC5P78333 572 aa13.78□□□□□ -0.2
SHOX2-205ENST00000490689 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms