RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 SYTL5Q8TDW5 730 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 SAR1BQ9Y6B6 198 aa15.55■□□□□ 0.08
ARHGEF39-205ENST00000490638 PIK3C2AO00443 1686 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 VWA5AO00534 786 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 RPS6KA5O75582 802 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 VPS41P49754 854 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 VAMP7P51809 220 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 GOLGA8FQ08AF8 430 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 GOLGA8DPQ0D2H9 430 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 DUOXA2Q1HG44 320 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 HPS3Q969F9 1004 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 ADAMTS1Q9UHI8 967 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 MRC1P22897 1456 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 INHBEP58166 350 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 TUBB2AQ13885 445 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 EFCAB12Q6NXP0 572 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 TRIM11Q96F44 468 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 TUBB2BQ9BVA1 445 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 MAP3K20Q9NYL2 800 aaKnown RBP15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 SLIT2O94813 1529 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 MSH4O15457 936 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 CIITAP33076 1130 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 EMC2Q15006 297 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 ADAT2Q7Z6V5 191 aaKnown RBP15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 ARRDC4Q8NCT1 418 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 GABPB2Q8TAK5 448 aaPredicted RBP15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 RSAD2Q8WXG1 361 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 ACAP3Q96P50 834 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 ODF2LQ9ULJ1 636 aa15.54■□□□□ 0.08
ARHGEF39-205ENST00000490638 RRN3P2A6NIE6 340 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 TSPY1Q01534 308 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 TIPINQ9BVW5 301 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 SLC38A10Q9HBR0 1119 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 SLC12A6Q9UHW9 1150 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 DNAJC12Q9UKB3 198 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 PPP2R2CQ9Y2T4 447 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 TRIM17Q9Y577 477 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 NPHP3-ACAD11A0A0J9YXS1 232 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 ASAP2O43150 1006 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 TRIM49P0CI25 452 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 TRIM49CP0CI26 452 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 EHHADHQ08426 723 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 PHLDB2Q86SQ0 1253 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 NDC80O14777 642 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 NLRP11P59045 1033 aaKnown RBP15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 ITKQ08881 620 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 KAZNQ674X7 775 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 LRRC8AQ8IWT6 810 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 UBLCP1Q8WVY7 318 aaPredicted RBP15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 GCNAQ96QF7 691 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 REEP2Q9BRK0 252 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 IFT122Q9HBG6 1241 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 MRPL47Q9HD33 250 aaKnown RBP15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 NRBP1Q9UHY1 535 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 BIRC2Q13490 618 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 LLGL1Q15334 1064 aa15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 ZNF746Q6NUN9 644 aaPredicted RBP15.53■□□□□ 0.08
ARHGEF39-205ENST00000490638 ARP10275 920 aa15.52■□□□□ 0.08
ARHGEF39-205ENST00000490638 CLUL1Q15846 466 aa15.52■□□□□ 0.08
ARHGEF39-205ENST00000490638 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
ARHGEF39-205ENST00000490638 FAM217BQ9NTX9 383 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF39-205ENST00000490638 RFC5P40937 340 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 NOGQ13253 232 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 SKIV2LQ15477 1246 aaKnown RBP15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 KRT39Q6A163 491 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 RGMBQ6NW40 437 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 TMEM270Q6UE05 265 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 KCNB2Q92953 911 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 ACOT2P49753 483 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 ERICH1Q86X53 443 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 GPD1LQ8N335 351 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 HAUS1Q96CS2 278 aa15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 STMN4Q9H169 189 aaPredicted RBP15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 NGRNQ9NPE2 291 aaKnown RBP15.52■□□□□ 0.07
ARHGEF39-205ENST00000490638 SMIM22K7EJ46 135 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 SREBF1P36956 1147 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 EIF4A3P38919 411 aaKnown RBP15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 ATN1P54259 1190 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 PPP1R2P3Q6NXS1 205 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 RDM1Q8NG50 284 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 ANKEF1Q9NU02 776 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 OPA1O60313 960 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 PPIL2Q13356 520 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 SAMD3Q8N6K7 520 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 PLEKHA4Q9H4M7 779 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 ZNF148Q9UQR1 794 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 MYOM1P52179 1685 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 SLC37A4O43826 429 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 CYP27A1Q02318 531 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 LMBRD2Q68DH5 695 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 TMEM35BQ8NCS4 154 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 AFG1LQ8WV93 481 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 TAF1DQ9H5J8 278 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 MYMKA6NI61 221 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 NAA35Q5VZE5 725 aa15.51■□□□□ 0.07
ARHGEF39-205ENST00000490638 CPSF3Q9UKF6 684 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms