RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 FAM126AQ9BYI3 521 aaPredicted RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 UBA5Q9GZZ9 404 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 ZBP1Q9H171 429 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 WDR6Q9NNW5 1121 aaKnown RBP8.45□□□□□ -1.06
COL9A1-209ENST00000489861 LTB4R2Q9NPC1 389 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 RGS18Q9NS28 235 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 TRPV2Q9Y5S1 764 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 IRAK3Q9Y616 596 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 ABCB11O95342 1321 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 PTPN13Q12923 2485 aa8.45□□□□□ -1.06
COL9A1-209ENST00000489861 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 PIEZO2Q9H5I5 2752 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 PATL2C9JE40 543 aaKnown RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 M0R2C6 588 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 CFBP00751 764 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 SLC3A2P08195 630 aaKnown RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 GOLGA8HP0CJ92 632 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 TOP1P11387 765 aaKnown RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 RLBP1P12271 317 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 FAM189BP81408 668 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 SP4Q02446 784 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 MTAPQ13126 283 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 MLF2Q15773 248 aaPredicted RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 CDC37Q16543 378 aaPredicted RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 IER5Q5VY09 327 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 C19orf48Q6RUI8 117 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 METTL7BQ6UX53 244 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 C15orf39Q6ZRI6 1047 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 PDZD3Q86UT5 571 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 TMEM173Q86WV6 379 aaPredicted RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 MCF2L2Q86YR7 1114 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 SPDYE1Q8NFV5 336 aaPredicted RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 PANK1Q8TE04 598 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 KIF12Q96FN5 646 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 LSM14BQ9BX40 385 aaKnown RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 CELF4Q9BZC1 486 aaKnown RBP8.44□□□□□ -1.06
COL9A1-209ENST00000489861 TMEM117Q9H0C3 514 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 CDHR5Q9HBB8 845 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 ATP6V0A4Q9HBG4 840 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 TMEM161AQ9NX61 479 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 NUMBLQ9Y6R0 609 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 CLUHO75153 1309 aa8.44□□□□□ -1.06
COL9A1-209ENST00000489861 NOTCH4Q99466 2003 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 DENND3A2RUS2 1198 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 SPDYE4A6NLX3 237 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 HRO43593 1189 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 RANBP6O60518 1105 aaKnown RBP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 SNHG28P0DPA3 235 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 LAMP2P13473 410 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 MARK3P27448 753 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 MAGEA9P43362 315 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 METAP2P50579 478 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 HSD17B4P51659 736 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 CLCN4P51793 760 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 IGBP1P78318 339 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 SRSF5Q13243 272 aaKnown RBP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 AASDHQ4L235 1098 aaPredicted RBP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 SLC44A4Q53GD3 710 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 ZBTB41Q5SVQ8 909 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 STOX1Q6ZVD7 989 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 TMEM40Q8WWA1 233 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 APPBP2Q92624 585 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 SCNM1Q9BWG6 230 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 NACAP1Q9BZK3 213 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 C1orf112Q9NSG2 853 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 ZBTB40Q9NUA8 1239 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 CACNA2D2Q9NY47 1150 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 ANKFY1Q9P2R3 1169 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 NOC2LQ9Y3T9 749 aaKnown RBP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 KDM3AQ9Y4C1 1321 aa8.43□□□□□ -1.06
COL9A1-209ENST00000489861 URB1O60287 2271 aaKnown RBP8.43□□□□□ -1.06
COL9A1-209ENST00000489861 SHISA7A6NL88 538 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 SPATA31C2B4DYI2 1134 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 MYBP10242 640 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 CTSAP10619 480 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 HOXA13P31271 388 aaPredicted RBP8.42□□□□□ -1.06
COL9A1-209ENST00000489861 RPS9P46781 194 aaKnown RBP8.42□□□□□ -1.06
COL9A1-209ENST00000489861 MRPS9P82933 396 aaKnown RBP8.42□□□□□ -1.06
COL9A1-209ENST00000489861 GHRHRQ02643 423 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 SIM2Q14190 667 aaPredicted RBP8.42□□□□□ -1.06
COL9A1-209ENST00000489861 QRICH1Q2TAL8 776 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 CLLU1OSQ5K130 101 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 LRRC43Q8N309 656 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 TMEM87AQ8NBN3 555 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 BCL7CQ8WUZ0 217 aaPredicted RBP8.42□□□□□ -1.06
COL9A1-209ENST00000489861 FGF14Q92915 247 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 VN1R3Q9BXE9 311 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 ELAC1Q9H777 363 aaKnown RBP8.42□□□□□ -1.06
COL9A1-209ENST00000489861 ECHDC1Q9NTX5 307 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 ST3GAL5Q9UNP4 418 aa8.42□□□□□ -1.06
COL9A1-209ENST00000489861 CCDC195A0A1B0GUA6 201 aa8.41□□□□□ -1.06
COL9A1-209ENST00000489861 M0QZ92 97 aa8.41□□□□□ -1.06
COL9A1-209ENST00000489861 FOXP2O15409 715 aa8.41□□□□□ -1.06
COL9A1-209ENST00000489861 FOXD2O60548 495 aaPredicted RBP8.41□□□□□ -1.06
COL9A1-209ENST00000489861 INSRRP14616 1297 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms