RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ZNF286BP0CG31 522 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 CYBAP13498 195 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 AKR1A1P14550 325 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 HOXD13P35453 343 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 NCKAP1LP55160 1127 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 PEX3P56589 373 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 SOX10P56693 466 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 KCNJ12Q14500 433 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 ZC2HC1CQ53FD0 456 aaPredicted RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 FAM114A1Q8IWE2 563 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 C16orf70Q9BSU1 422 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 STRA6Q9BX79 667 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 ST6GALNAC4Q9H4F1 302 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 SRRDQ9UH36 339 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 MAFO75444 373 aaPredicted RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 EEF1GP26641 437 aaKnown RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 TBC1D8BQ0IIM8 1120 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 EDRF1Q3B7T1 1238 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 TCP11X2Q5H9J9 407 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 IRF2BP1Q8IU81 584 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 EXOC8Q8IYI6 725 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 SPIRE2Q8WWL2 714 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 LENG1Q96BZ8 264 aaPredicted RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 CTAGE1Q96RT6 745 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 TYW1Q9NV66 732 aaKnown RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 MAGEC2Q9UBF1 373 aaPredicted RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 LIMA1Q9UHB6 759 aaKnown RBP23.86■■□□□ 1.41
SMC4-221ENST00000489573 TRAF3IP3Q9Y228 551 aa23.86■■□□□ 1.41
SMC4-221ENST00000489573 A6NJR5 290 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 ZBTB42B2RXF5 422 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 PDXKO00764 312 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 TPM3P06753 285 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 SMTNP53814 917 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 FKBP3Q00688 224 aaKnown RBP23.85■■□□□ 1.41
SMC4-221ENST00000489573 LRRC55Q6ZSA7 311 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 APTXQ7Z2E3 356 aaKnown RBP23.85■■□□□ 1.41
SMC4-221ENST00000489573 TRPV1Q8NER1 839 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 BSNDQ8WZ55 320 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 IFT74Q96LB3 600 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 AP5M1Q9H0R1 490 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 RNPEPQ9H4A4 650 aa23.85■■□□□ 1.41
SMC4-221ENST00000489573 ZMYM2Q9UBW7 1377 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 CCDC169A6NNP5 214 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 CALUO43852 315 aaPredicted RBP23.84■■□□□ 1.41
SMC4-221ENST00000489573 GAS2O43903 313 aaKnown RBP23.84■■□□□ 1.41
SMC4-221ENST00000489573 NPTX2P47972 431 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 KCNA1Q09470 495 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 KRT31Q15323 416 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 HAUS6Q7Z4H7 955 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 TMEM143Q96AN5 459 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 ERO1AQ96HE7 468 aa23.84■■□□□ 1.41
SMC4-221ENST00000489573 H3BRB1 525 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 SLC16A4O15374 487 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 GNRH1P01148 92 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 ARL2P36404 184 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 GTF2BQ00403 316 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 ZNF484Q5JVG2 852 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 ZC3H3Q8IXZ2 948 aaKnown RBP23.83■■□□□ 1.41
SMC4-221ENST00000489573 CNOT6LQ96LI5 555 aaKnown RBP23.83■■□□□ 1.41
SMC4-221ENST00000489573 CEP63Q96MT8 703 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 NAP1L5Q96NT1 182 aaPredicted RBP23.83■■□□□ 1.41
SMC4-221ENST00000489573 JPH2Q9BR39 696 aaPredicted RBP23.83■■□□□ 1.41
SMC4-221ENST00000489573 NTPCRQ9BSD7 190 aaKnown RBP23.83■■□□□ 1.41
SMC4-221ENST00000489573 TUT1Q9H6E5 874 aaKnown RBP23.83■■□□□ 1.41
SMC4-221ENST00000489573 KMT5AQ9NQR1 393 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 KCNG1Q9UIX4 513 aa23.83■■□□□ 1.41
SMC4-221ENST00000489573 A0A1B0GTH6 734 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 FKTNO75072 461 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 CPT1AP50416 773 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 BRDTQ58F21 947 aaPredicted RBP23.82■■□□□ 1.4
SMC4-221ENST00000489573 CREBRFQ8IUR6 639 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 KSR1Q8IVT5 923 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 DRC7Q8IY82 874 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 HVCN1Q96D96 273 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 ACCSQ96QU6 501 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 COL1A2P08123 1366 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 IGKV6-21A0A0C4DH24 114 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 LRRC10BA6NIK2 292 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 PPP2R5AQ15172 486 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 FILIP1LQ4L180 1135 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 SPC24Q8NBT2 197 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 TMEM161BQ8NDZ6 487 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 ASAP3Q8TDY4 903 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 EEF2KMTQ96G04 330 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 TMEM206Q9H813 350 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 TAB2Q9NYJ8 693 aa23.82■■□□□ 1.4
SMC4-221ENST00000489573 H0YCG3 227 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 TGFB1I1O43294 461 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 DUSP11O75319 330 aaKnown RBP23.81■■□□□ 1.4
SMC4-221ENST00000489573 INSRRP14616 1297 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 COPB1P53618 953 aaKnown RBP23.81■■□□□ 1.4
SMC4-221ENST00000489573 ARHGEF6Q15052 776 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 HS2ST1Q7LGA3 356 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 SYCP3Q8IZU3 236 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 TRAPPC12Q8WVT3 735 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 TCP11Q8WWU5 503 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 KIFC3Q9BVG8 833 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 GBP3Q9H0R5 595 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 INTS13Q9NVM9 706 aa23.81■■□□□ 1.4
SMC4-221ENST00000489573 PTMAP06454 111 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms