RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SUGCTQ9HAC7 445 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 SIP14410 1827 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 MYO9BQ13459 2157 aa11.81□□□□□ -0.52
SCAMP4-208ENST00000489554 MARCH6O60337 910 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 GPR32O75388 356 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 VTNP04004 478 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 STAG3L1P0CL83 205 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 PRPHP41219 470 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 CLCN3P51790 818 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 PSMC5P62195 406 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 SPIRE1Q08AE8 756 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 TBC1D8BQ0IIM8 1120 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 NFX1Q12986 1120 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 STK38Q15208 465 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 TARBP2Q15633 366 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 KIZQ2M2Z5 673 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 NPAS4Q8IUM7 802 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 SLFN12Q8IYM2 578 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 LINC01465Q8N7H1 131 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 LINC01599Q8WXQ3 324 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 CLIC6Q96NY7 704 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 NIFKQ9BYG3 293 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 SEPT9Q9UHD8 586 aaPredicted RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 NOC2LQ9Y3T9 749 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 RWDD3Q9Y3V2 267 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 SRPRBQ9Y5M8 271 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 ADGRA3Q8IWK6 1321 aa11.8□□□□□ -0.52
SCAMP4-208ENST00000489554 CHD7Q9P2D1 2997 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 LAD1O00515 517 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 DGKIO75912 1065 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 BMP15O95972 392 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 OR52Z1P0C646 297 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 QARSP47897 775 aaKnown RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 MRPS5P82675 430 aaKnown RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 CDC42EP1Q00587 391 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 PTPROQ16827 1216 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 TJAP1Q5JTD0 557 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 RTN4RL1Q86UN2 441 aaPredicted RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 LRRC71Q8N4P6 559 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 KCNG4Q8TDN1 519 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 ZNF689Q96CS4 500 aaPredicted RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 OSMRQ99650 979 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 JPH2Q9BR39 696 aaPredicted RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 COL25A1Q9BXS0 654 aaPredicted RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 CDHR5Q9HBB8 845 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 RC3H2Q9HBD1 1191 aaKnown RBP11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 C1orf112Q9NSG2 853 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 ST3GAL5Q9UNP4 418 aa11.79□□□□□ -0.52
SCAMP4-208ENST00000489554 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 DENND3A2RUS2 1198 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 H3BNC9 293 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 EML1O00423 815 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 STBD1O95210 358 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 RB1P06400 928 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 SARSP49591 514 aaKnown RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 DNM2P50570 870 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 NLRP11P59045 1033 aaKnown RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 BTG3Q14201 252 aaPredicted RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 EPHA7Q15375 998 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 CALCRLQ16602 461 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 AAK1Q2M2I8 961 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 MTERF2Q49AM1 385 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 SHC4Q6S5L8 630 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 USP49Q70CQ1 688 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 CRIPAKQ8N1N5 446 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 ASB2Q96Q27 587 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 PPP1R16BQ96T49 567 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 ADAM2Q99965 735 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 GOLPH3LQ9H4A5 285 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 RGS18Q9NS28 235 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 COG5Q9UP83 839 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 PPME1Q9Y570 386 aa11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
SCAMP4-208ENST00000489554 EYSQ5T1H1 3165 aa11.77□□□□□ -0.52
SCAMP4-208ENST00000489554 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
SCAMP4-208ENST00000489554 FAM237AA0A1B0GTK4 181 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms