RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 CDC42EP1Q00587 391 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 TBC1D8BQ0IIM8 1120 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 BLOC1S2Q6QNY1 142 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 TMEM184AQ6ZMB5 413 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 Q6ZUG5 572 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 BRF1Q92994 677 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
SFXN3-207ENST00000489434 RIT2Q99578 217 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 CWH43Q9H720 699 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
SFXN3-207ENST00000489434 CACNA1HO95180 2353 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 FSCN2O14926 492 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 EOMESO95936 686 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 TECP42680 631 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 DNM2P50570 870 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 USP11P51784 963 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 JAK3P52333 1124 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 PRKCEQ02156 737 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 LRRC71Q8N4P6 559 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 FBXL6Q8N531 539 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 SUSD6Q92537 303 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
SFXN3-207ENST00000489434 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
SFXN3-207ENST00000489434 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 CHMP2AO43633 222 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
SFXN3-207ENST00000489434 PTPN5P54829 565 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
SFXN3-207ENST00000489434 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 SMC1AQ14683 1233 aaKnown RBP13.45□□□□□ -0.26
SFXN3-207ENST00000489434 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 CES5AQ6NT32 575 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 ECHDC2Q86YB7 292 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 VN1R2Q8NFZ6 395 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 RDM1Q8NG50 284 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 RSPH1Q8WYR4 309 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 CASP10Q92851 521 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 PHKBQ93100 1093 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 TEKT3Q9BXF9 490 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 SLC26A6Q9BXS9 759 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 RNF26Q9BY78 433 aaPredicted RBP13.45□□□□□ -0.26
SFXN3-207ENST00000489434 NR2E1Q9Y466 385 aa13.45□□□□□ -0.26
SFXN3-207ENST00000489434 A0A0U1RQF3 1178 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 DARSP14868 501 aaKnown RBP13.44□□□□□ -0.26
SFXN3-207ENST00000489434 CPA1P15085 419 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 PSMA5P28066 241 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 GPC3P51654 580 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 NLRP5P59047 1200 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 LRRC55Q6ZSA7 311 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 LENG9Q96B70 501 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 NECTIN4Q96NY8 510 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
SFXN3-207ENST00000489434 IRF2BPLQ9H1B7 796 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 SH3GLB2Q9NR46 395 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 NID2Q14112 1375 aa13.44□□□□□ -0.26
SFXN3-207ENST00000489434 HIDE1A8MVS5 230 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 MSH4O15457 936 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 ZNF862O60290 1169 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 SKIP12755 728 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
SFXN3-207ENST00000489434 RPS6KB1P23443 525 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 CA8P35219 290 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 PTPN21Q16825 1174 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 CLLU1OSQ5K130 101 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 FBXL16Q8N461 479 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 MRPL43Q8N983 215 aaKnown RBP13.43□□□□□ -0.26
SFXN3-207ENST00000489434 SLC5A5Q92911 643 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 KCNB2Q92953 911 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 TMEM169Q96HH4 297 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
SFXN3-207ENST00000489434 S1PR5Q9H228 398 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 VPS54Q9P1Q0 977 aa13.43□□□□□ -0.26
SFXN3-207ENST00000489434 SEPT9Q9UHD8 586 aaPredicted RBP13.43□□□□□ -0.26
SFXN3-207ENST00000489434 ZFHX2Q9C0A1 2572 aaPredicted RBP13.43□□□□□ -0.26
SFXN3-207ENST00000489434 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 REC8O95072 547 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 IFNAR1P17181 557 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 HSPA4P34932 840 aa13.42□□□□□ -0.26
SFXN3-207ENST00000489434 PBX3P40426 434 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms