RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
USP11-211ENST00000489111 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
USP11-211ENST00000489111 SRRDQ9UH36 339 aa11.04□□□□□ -0.64
USP11-211ENST00000489111 KCNG1Q9UIX4 513 aa11.04□□□□□ -0.64
USP11-211ENST00000489111 PDXKO00764 312 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 SLC16A4O15374 487 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ADCY6O43306 1168 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 FKTNO75072 461 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 MAFO75444 373 aaPredicted RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 GNRH1P01148 92 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 IGHA2P01877 340 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 CYBAP13498 195 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 CNGA1P29973 690 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ABCD1P33897 745 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 NPTX2P47972 431 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 FKBP3Q00688 224 aaKnown RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 TARBP2Q15633 366 aaKnown RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 EDRF1Q3B7T1 1238 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ZC2HC1CQ53FD0 456 aaPredicted RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 TCP11X2Q5H9J9 407 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ZNF484Q5JVG2 852 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ZNF507Q8TCN5 953 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 RAET1EQ8TD07 263 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 TCP11Q8WWU5 503 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 TMEM143Q96AN5 459 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 LENG1Q96BZ8 264 aaPredicted RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 HVCN1Q96D96 273 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 ACCSQ96QU6 501 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 KCTD10Q9H3F6 313 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 SPC25Q9HBM1 224 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 KMT5AQ9NQR1 393 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 PDLIM7Q9NR12 457 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 TYW1Q9NV66 732 aaKnown RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 GNEQ9Y223 722 aaKnown RBP11.03□□□□□ -0.64
USP11-211ENST00000489111 Q9Y3F1 56 aa11.03□□□□□ -0.64
USP11-211ENST00000489111 A6NJR5 290 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 H3BRB1 525 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 PES1O00541 588 aaKnown RBP11.02□□□□□ -0.65
USP11-211ENST00000489111 CETN3O15182 167 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 GNA14O95837 355 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 HMGCRP04035 888 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 SCP2P22307 547 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 RPL13P26373 211 aaKnown RBP11.02□□□□□ -0.65
USP11-211ENST00000489111 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
USP11-211ENST00000489111 DNM2P50570 870 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 NCKAP1LP55160 1127 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 SOX10P56693 466 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 IGBP1P78318 339 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 PPFIA1Q13136 1202 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 KRT31Q15323 416 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 FSCN1Q16658 493 aaKnown RBP11.02□□□□□ -0.65
USP11-211ENST00000489111 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 LRRC55Q6ZSA7 311 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 HAUS6Q7Z4H7 955 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 RETREG2Q8NC44 543 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 DEPTORQ8TB45 409 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 FIZ1Q96SL8 496 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 C16orf70Q9BSU1 422 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 GBP3Q9H0R5 595 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 ST6GALNAC4Q9H4F1 302 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 TUT1Q9H6E5 874 aaKnown RBP11.02□□□□□ -0.65
USP11-211ENST00000489111 TMEM206Q9H813 350 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 TAB2Q9NYJ8 693 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 LIMA1Q9UHB6 759 aaKnown RBP11.02□□□□□ -0.65
USP11-211ENST00000489111 EXOC7Q9UPT5 735 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 TRAF3IP3Q9Y228 551 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 COL1A2P08123 1366 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 THSD7BQ9C0I4 1608 aa11.02□□□□□ -0.65
USP11-211ENST00000489111 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 LRRIQ4A6NIV6 560 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 ZBTB42B2RXF5 422 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 N4BP3O15049 544 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 SEPT4O43236 478 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 ADCY3O60266 1144 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 DUSP11O75319 330 aaKnown RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 PPP1R37O75864 691 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 NR3C1P04150 777 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 MYL3P08590 195 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 RARBP10826 455 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 INSRRP14616 1297 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 ELNP15502 786 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 NR2F2P24468 414 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 HOXD13P35453 343 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 NAMPTP43490 491 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 COPB1P53618 953 aaKnown RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 CHMP4BP1P59074 171 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 MAP2K1Q02750 393 aaPredicted RBP11.01□□□□□ -0.65
USP11-211ENST00000489111 IER5Q5VY09 327 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 METTL13Q8N6R0 699 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 TMEM161BQ8NDZ6 487 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 ASAP3Q8TDY4 903 aa11.01□□□□□ -0.65
USP11-211ENST00000489111 TRAPPC12Q8WVT3 735 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms