RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 WRAP73Q9P2S5 460 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-218ENST00000489037 PCDHB6Q9Y5E3 794 aa15.94■□□□□ 0.14
BRCA1-218ENST00000489037 NLRC5Q86WI3 1866 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 LINC01553A4QN01 128 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 K7ELQ4 463 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 ASAP2O43150 1006 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 DARSP14868 501 aaKnown RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 IBSPP21815 317 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 TOB1P50616 345 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 PDIA5Q14554 519 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 NBR1Q14596 966 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 FIBCD1Q8N539 461 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 INTS4Q96HW7 963 aaKnown RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 ZNF668Q96K58 619 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 NACC1Q96RE7 527 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 ADAM2Q99965 735 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 POLR3CQ9BUI4 534 aaPredicted RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 DHX33Q9H6R0 707 aaKnown RBP15.93■□□□□ 0.14
BRCA1-218ENST00000489037 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 PCDHB7Q9Y5E2 793 aa15.93■□□□□ 0.14
BRCA1-218ENST00000489037 A0A087WZ62 844 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 DGAT1O75907 488 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 MUTP22033 750 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 SFPQP23246 707 aaKnown RBP eCLIP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 RPA1P27694 616 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 SARSP49591 514 aaKnown RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 ERVK-21P61565 698 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 DRP2Q13474 957 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 EMC2Q15006 297 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 DTHD1Q6ZMT9 781 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 SLC24A5Q71RS6 500 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 RTN4RL1Q86UN2 441 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 HSCBQ8IWL3 235 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 SP7Q8TDD2 431 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 NLRP4Q96MN2 994 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 FDXACB1Q9BRP7 624 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 TMX1Q9H3N1 280 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 ATP6V0A4Q9HBG4 840 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 RGS18Q9NS28 235 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 BMP2KQ9NSY1 1161 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-218ENST00000489037 MTUS1Q9ULD2 1270 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
BRCA1-218ENST00000489037 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 RBAK-RBAKDNI3L0D1 243 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 ZBTB39O15060 712 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 CCT6AP40227 531 aaKnown RBP15.91■□□□□ 0.14
BRCA1-218ENST00000489037 PRPHP41219 470 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 BTG3Q14201 252 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-218ENST00000489037 MXD4Q14582 209 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-218ENST00000489037 CATSPER3Q86XQ3 398 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 C4orf32Q8N8J7 132 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 ZNF579Q8NAF0 562 aaKnown RBP15.91■□□□□ 0.14
BRCA1-218ENST00000489037 FBXO22Q8NEZ5 403 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 PIGOQ8TEQ8 1089 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 PRPF31Q8WWY3 499 aaKnown RBP15.91■□□□□ 0.14
BRCA1-218ENST00000489037 LINC01599Q8WXQ3 324 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 TMEM143Q96AN5 459 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 DACT1Q9NYF0 836 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 RWDD3Q9Y3V2 267 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 ADGRA3Q8IWK6 1321 aa15.91■□□□□ 0.14
BRCA1-218ENST00000489037 PRRC2BQ5JSZ5 2229 aaKnown RBP15.9■□□□□ 0.14
BRCA1-218ENST00000489037 RFXAPO00287 272 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 MED24O75448 989 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 DGKIO75912 1065 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 ARHGEF15O94989 841 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 HSP90AA1P07900 732 aaKnown RBP15.9■□□□□ 0.14
BRCA1-218ENST00000489037 SRGAP2CP0DJJ0 459 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 SPATA31C1P0DKV0 1188 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 RARRES1P49788 294 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 TFDP1Q14186 410 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 KRT79Q5XKE5 535 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 SLC17A8Q8NDX2 589 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 PPM1EQ8WY54 764 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 SNX21Q969T3 373 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 CHST12Q9NRB3 414 aa15.9■□□□□ 0.14
BRCA1-218ENST00000489037 DBR1Q9UK59 544 aaKnown RBP15.9■□□□□ 0.14
BRCA1-218ENST00000489037 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 C9IYK1 514 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 MGEA5O60502 916 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 BMP15O95972 392 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 PHKA2P46019 1235 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 LAMTOR4Q0VGL1 99 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 ADGRE1Q14246 886 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 CATSPER4Q7RTX7 472 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 SRGAP1Q7Z6B7 1085 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 FERMT3Q86UX7 667 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 KSR1Q8IVT5 923 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 CMTR2Q8IYT2 770 aaKnown RBP15.89■□□□□ 0.13
BRCA1-218ENST00000489037 MICALL1Q8N3F8 863 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 SNX29Q8TEQ0 813 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 C17orf80Q9BSJ5 609 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 ELAC1Q9H777 363 aaKnown RBP15.89■□□□□ 0.13
BRCA1-218ENST00000489037 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
BRCA1-218ENST00000489037 FNDC1Q4ZHG4 1894 aaPredicted RBP15.88■□□□□ 0.13
BRCA1-218ENST00000489037 A0A087WWV3 80 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 HOXA2O43364 376 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms