RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 TSPYL2Q9H2G4 693 aaPredicted RBP16.81■□□□□ 0.28
CYTH3-209ENST00000488964 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
CYTH3-209ENST00000488964 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.81■□□□□ 0.28
CYTH3-209ENST00000488964 DACT1Q9NYF0 836 aa16.81■□□□□ 0.28
CYTH3-209ENST00000488964 ST3GAL5Q9UNP4 418 aa16.81■□□□□ 0.28
CYTH3-209ENST00000488964 NOC2LQ9Y3T9 749 aaKnown RBP16.81■□□□□ 0.28
CYTH3-209ENST00000488964 TTC3P53804 2025 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 ENPP3O14638 875 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 TOB1P50616 345 aaPredicted RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 GRIN2CQ14957 1233 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 TGS1Q96RS0 853 aaKnown RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
CYTH3-209ENST00000488964 RWDD3Q9Y3V2 267 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
CYTH3-209ENST00000488964 PTPRSQ13332 1948 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 ARHGEF35A5YM69 484 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 SARSP49591 514 aaKnown RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 RARRES1P49788 294 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 HTRA4P83105 476 aaPredicted RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 NCBP1Q09161 790 aaKnown RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 ARL6IP4Q66PJ3 421 aaKnown RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 SLC24A5Q71RS6 500 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 TMCO2Q7Z6W1 182 aaPredicted RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 FAM228AQ86W67 206 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 MCPH1Q8NEM0 835 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 MYLIPQ8WY64 445 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 CEP89Q96ST8 783 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 OSBPL7Q9BZF2 842 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 PRDM12Q9H4Q4 367 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 DBR1Q9UK59 544 aaKnown RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 PCDHB7Q9Y5E2 793 aa16.79■□□□□ 0.28
CYTH3-209ENST00000488964 LAMA2P24043 3122 aaKnown RBP16.79■□□□□ 0.28
CYTH3-209ENST00000488964 ARID2Q68CP9 1835 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 A0A087WZ62 844 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 HOXA2O43364 376 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 SKIP12755 728 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 PHKA2P46019 1235 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 ATP2C1P98194 919 aaPredicted RBP16.78■□□□□ 0.28
CYTH3-209ENST00000488964 TAP1Q03518 808 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
CYTH3-209ENST00000488964 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 FIBCD1Q8N539 461 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 TMEM40Q8WWA1 233 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 TMEM143Q96AN5 459 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 CDK5RAP3Q96JB5 506 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 ADAM2Q99965 735 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
CYTH3-209ENST00000488964 CDHR5Q9HBB8 845 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 RGS18Q9NS28 235 aa16.78■□□□□ 0.28
CYTH3-209ENST00000488964 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
CYTH3-209ENST00000488964 ADGRA3Q8IWK6 1321 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 USO1O60763 962 aaKnown RBP16.77■□□□□ 0.28
CYTH3-209ENST00000488964 MED24O75448 989 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
CYTH3-209ENST00000488964 IGFBP4P22692 258 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 DRP2Q13474 957 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 POTEGQ6S5H5 508 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 CATSPER4Q7RTX7 472 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 KCTD17Q8N5Z5 321 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 C4orf32Q8N8J7 132 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 IGSF22Q8N9C0 903 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
CYTH3-209ENST00000488964 PIGOQ8TEQ8 1089 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 NT5C3AQ9H0P0 336 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
CYTH3-209ENST00000488964 CHST12Q9NRB3 414 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
CYTH3-209ENST00000488964 COL4A6Q14031 1691 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 LINC01553A4QN01 128 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 SLC26A4O43511 780 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 ERLIN2O94905 339 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 SYT1P21579 422 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 ERVK-21P61565 698 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 LAMTOR4Q0VGL1 99 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 BTG3Q14201 252 aaPredicted RBP16.76■□□□□ 0.27
CYTH3-209ENST00000488964 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 CMTR2Q8IYT2 770 aaKnown RBP16.76■□□□□ 0.27
CYTH3-209ENST00000488964 ABI1Q8IZP0 508 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 MAFAQ8NHW3 353 aaPredicted RBP16.76■□□□□ 0.27
CYTH3-209ENST00000488964 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
CYTH3-209ENST00000488964 RSPH1Q8WYR4 309 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
CYTH3-209ENST00000488964 AK8Q96MA6 479 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 TMX1Q9H3N1 280 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 ELAC1Q9H777 363 aaKnown RBP16.76■□□□□ 0.27
CYTH3-209ENST00000488964 DNM3Q9UQ16 869 aa16.76■□□□□ 0.27
CYTH3-209ENST00000488964 LCHNA4D1U4 455 aa16.75■□□□□ 0.27
CYTH3-209ENST00000488964 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms