RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 PRLP01236 227 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 APPP05067 770 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 SDSP20132 328 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 HIBADHP31937 336 aaKnown RBP6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 SLC6A3Q01959 620 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 USP51Q70EK9 711 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 EXOC8Q8IYI6 725 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 FOXB1Q99853 325 aa6.53□□□□□ -1.36
CTNNB1-215ENST00000488914 PTPDC1A2A3K4 754 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 C2orf78A6NCI8 922 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 ACRV1P26436 265 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 PTH1RQ03431 593 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 RIN1Q13671 783 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 SF3A1Q15459 793 aaKnown RBP6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 DDX53Q86TM3 631 aaKnown RBP6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 SGMS1Q86VZ5 419 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 CHST14Q8NCH0 376 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 NELFAQ9H3P2 528 aa6.52□□□□□ -1.37
CTNNB1-215ENST00000488914 OPA1O60313 960 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 MAFO75444 373 aaPredicted RBP6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 IGFALSP35858 605 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 ADCY7P51828 1080 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 ARHGAP44Q17R89 818 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 LSM12Q3MHD2 195 aaKnown RBP6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 FNDC3BQ53EP0 1204 aaKnown RBP6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 D2HGDHQ8N465 521 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 PLEKHG4BQ96PX9 1271 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 SH3BP1Q9Y3L3 701 aa6.51□□□□□ -1.37
CTNNB1-215ENST00000488914 ZNF202O95125 648 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 ASLP04424 464 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 FNTBP49356 437 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 ANAPC15P60006 121 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 ADAM8P78325 824 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 PIK3R6Q5UE93 754 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 FNDC7Q5VTL7 733 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 KLHDC10Q6PID8 442 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 NOL8Q76FK4 1167 aaKnown RBP6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 KIAA1958Q8N8K9 716 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 CACTINQ8WUQ7 758 aaKnown RBP6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 MAML3Q96JK9 1138 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 RPL10LQ96L21 214 aaKnown RBP6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 C16orf92Q96LL3 132 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 GPHA2Q96T91 129 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 SAE1Q9UBE0 346 aaPredicted RBP6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 DENND2AQ9ULE3 1009 aa6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 RBM8AQ9Y5S9 174 aaKnown RBP6.5□□□□□ -1.37
CTNNB1-215ENST00000488914 LOC102724159A0A0B4J2E5 919 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 SLC9A1P19634 815 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 MAP3K12Q12852 859 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 FHL2Q14192 279 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 PWP2Q15269 919 aaKnown RBP6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 HSP90AB4PQ58FF6 505 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 CREB3L3Q68CJ9 461 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 SLFN12LQ6IEE8 588 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 OR5AN1Q8NGI8 311 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 SH3TC2Q8TF17 1288 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 RABGGTAQ92696 567 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 NKD2Q969F2 451 aaPredicted RBP6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 MENTQ9BUN1 341 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 CEP72Q9P209 647 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 VWA7Q9Y334 891 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 RIPOR2Q9Y4F9 1068 aa6.49□□□□□ -1.37
CTNNB1-215ENST00000488914 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 UBA6A0AVT1 1052 aaPredicted RBP6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 PMS2P1A4D2B8 440 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 CAPN14A8MX76 684 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 JMJD7P0C870 316 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 ROM1Q03395 351 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 CDCA2Q69YH5 1023 aaPredicted RBP6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 ADGRE4PQ86SQ3 457 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 ANKRD53Q8N9V6 530 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 ELF4Q99607 663 aaPredicted RBP6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 MSL2Q9HCI7 577 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 ACSS2Q9NR19 701 aa6.48□□□□□ -1.37
CTNNB1-215ENST00000488914 B4E1Z4 1266 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 CBX4O00257 560 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 BPIFB4P59827 614 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 DGKDQ16760 1214 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 PRAMEF9Q5VWM5 478 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 ESRP1Q6NXG1 681 aaKnown RBP6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 GAREM2Q75VX8 874 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 SREK1Q8WXA9 508 aaKnown RBP6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 SLC7A6OSQ96CW6 309 aaPredicted RBP6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 TUBGCP5Q96RT8 1024 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 SLC6A15Q9H2J7 730 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 PCIF1Q9H4Z3 704 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 DNAI1Q9UI46 699 aa6.47□□□□□ -1.37
CTNNB1-215ENST00000488914 H7C1D1 291 aa6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 H2AFYO75367 372 aaKnown RBP6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 ASMTLO95671 621 aa6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 HNRNPLP14866 589 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 HHEXQ03014 270 aa6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 ABHD18Q0P651 414 aa6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 TCIRG1Q13488 830 aa6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 RRP1BQ14684 758 aaKnown RBP6.46□□□□□ -1.38
CTNNB1-215ENST00000488914 NFE2L2Q16236 605 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms